Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme25242g00001 ATGGTCCTGTCTCCAAGTTTGGAGAATCATATAGTCCCAACATATGAATTGTTGTATAGATTATTGCAATCAGACAAGGAAACTATTGATGTTGTAATTCATAATCCATATTTACTTAGTAACTGTCGTGTGCCACATAACATCACATTGTTGGTTGAGAATGGAGTGAAGGACTCAACCATTGGAAGATTGCTTCGGACGCATTCTCGGGCATTGGATACGAAGAAAACTTACATGCTAAAGTTGGTGAAGGAATTGAAGGATTTGGGTTTTAATCCTTCAAAAACAACCTTTGGTATAGCATTGGAAGCGAAACAATCGGTAAACAAAACATTGTGGAAAGAGAAAGTTGATGCCTTTAAGAAATGGGGGTGGTCTGATGAAGATGTTATAGAAGCATTTAGAAGGAACCCTCAAT 418 0.3756 MVLSPSLENHIVPTYELLYRLLQSDKETIDVVIHNPYLLSNCRVPHNITLLVENGVKDSTIGRLLRTHSRALDTKKTYMLKLVKELKDLGFNPSKTTFGIALEAKQSVNKTLWKEKVDAFKKWGWSDEDVIEAFRRNPQ 139
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme25242g00001 139 Pfam mTERF 2 139 IPR003690 GO:0003690|GO:0006355
Trme25242g00001 139 PANTHER CGI-12 PROTEIN-RELATED 4 139 IPR003690 GO:0003690|GO:0006355
Trme25242g00001 139 Gene3D Transcription termination factor 3, mitochondrial 1 139 IPR038538 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme25242g00001 Trme-Chr25242 21 438 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Trme25242g00001 mTERF 8.7e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme25242g00001 K15031 - gmx:102667698 136.732