Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme25241g00001 ATGGGTGGTGTTGCATGGACAGAAGAAGAAGATCATTTGCTTAAGAAATGCATACAACAATATGGTGAAGGAAAGTGGCATCGGGTTCCTCTATTGGCAG 100 0.43 MGGVAWTEEEDHLLKKCIQQYGEGKWHRVPLLA 33
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme25241g00001 33 CDD SANT 5 29 IPR001005 -
Trme25241g00001 33 Pfam Myb-like DNA-binding domain 5 30 IPR001005 -
Trme25241g00001 33 SUPERFAMILY Homeodomain-like 5 31 IPR009057 -
Trme25241g00001 33 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 1 33 IPR017930 -
Trme25241g00001 33 ProSiteProfiles Myb-like domain profile. 6 33 IPR001005 -
Trme25241g00001 33 Gene3D - 4 32 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme25241g00001 5 33 MYB Transcription Factor Family AT1G56650 68.966 4.89e-11 52.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Trme25241g00001 Myb_DNA-binding 3e-08 CL0123