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Gene search
Sequence information
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Gene
Cds
Cds_length
GC_content
Pep
Pep_length
Trme25221g00001
CAAATATGTCATCGGGACCTGAAGTTGGAAAACACTTTGTTGGATGGAGACCCAGCACTTCATTTGAAGATTTGTGATTTTGGATACTCTAAGTCTTCGGTGCTTCATTCGCAACCAAAGTCAACTGTGGGAACTCCAGCATATATTGCTCCAGAAGTACTGCTGAAGCAAGAGTATGATGGAAAGGTTGCAGATGTATGGTCATGTGGAGTAACCTTATACGTGATGCTAGTGGGATCATACCCCTTTGAAGATCCCGTTAATCCGAAGGATTTCCGGAAGACAATTCAGGTTGATCAGATATTAAGCTGTTTGCATGTTTTCTTTATGCGCCTCTGA
339
0.4248
QICHRDLKLENTLLDGDPALHLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLLKQEYDGKVADVWSCGVTLYVMLVGSYPFEDPVNPKDFRKTIQVDQILSCLHVFFMRL
112
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Annotation information
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Seq ID
Length
Analysis
Description
Start
End
IPR
GO
Trme25221g00001
112
PANTHER
SERINE/THREONINE KINASE
1
94
-
-
Trme25221g00001
112
ProSiteProfiles
Protein kinase domain profile.
1
112
IPR000719
GO:0004672|GO:0005524|GO:0006468
Trme25221g00001
112
SUPERFAMILY
Protein kinase-like (PK-like)
2
97
IPR011009
-
Trme25221g00001
112
ProSitePatterns
Serine/Threonine protein kinases active-site signature.
2
14
IPR008271
GO:0004672|GO:0006468
Trme25221g00001
112
Gene3D
Transferase(Phosphotransferase) domain 1
1
107
-
-
Trme25221g00001
112
Pfam
Protein kinase domain
2
97
IPR000719
GO:0004672|GO:0005524|GO:0006468
Trme25221g00001
112
SMART
serkin_6
1
109
IPR000719
GO:0004672|GO:0005524|GO:0006468
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Duplication type information
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Gene
Chromosome
Start
End
Duplicated_type
Trme25221g00001
Trme-Chr25221
102
1209
Dispersed
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Functional genes information
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Gene
Gene_start
Gene_end
Function
Ath_gene
Identity(%)
E-value
Score
Trme25221g00001
2
99
CBL-interacting serine-threonine protein kinases
AT5G10930
50.467
3.08e-25
96.3
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Transcription factors information
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Regulatory Factors
Family
Gene
Hmm_acc
Hmm_name
E_value
Clan
PK
CAMK_OST1L
Trme25221g00001
Pkinase
9.2e-28
CL0016
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Pathway information
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Query
KO
Definition
Second KO
KEGG Genes ID
GHOSTX Score
Trme25221g00001
K14498
-
gmx:100788440
194.512
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