Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme251951g00001 AAAGCATTGTCCAATTGTTTTCAGAAAGTAGATGATGAGATTGAACCTGTTGCTCCTGAGACTGCTGGCTCCACTGCAGTGGTTGCCATTTTAAGTCAAACCCACATAATAGTTGCAAATTGCGGGGATTCAAGAGCTGTCTTGTATCGCGGGAAAGAAGCCATTGCATTGTCTTCTGACCACAAACCAAATCGAGAGGATGAGAGAGCTAGAATAGAAGCTGCAGGAGGAAGAGTCATACATTGGAAAGGATACAGAGTTCTTGGTGTCTTGGCCATGTCAAG 284 0.4437 KALSNCFQKVDDEIEPVAPETAGSTAVVAILSQTHIIVANCGDSRAVLYRGKEAIALSSDHKPNREDERARIEAAGGRVIHWKGYRVLGVLAMS 94
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme251951g00001 94 CDD PP2Cc 1 94 IPR001932 -
Trme251951g00001 94 SUPERFAMILY PP2C-like 2 94 IPR036457 -
Trme251951g00001 94 ProSiteProfiles PPM-type phosphatase domain profile. 1 94 IPR001932 -
Trme251951g00001 94 Pfam Protein phosphatase 2C 2 94 IPR001932 -
Trme251951g00001 94 Gene3D - 1 94 IPR036457 -
Trme251951g00001 94 PANTHER PROTEIN PHOSPHATASE 2 94 IPR015655 GO:0004722|GO:0006470
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme251951g00001 Trme-Chr251951 1 380 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme251951g00001 1 94 PP2C-type Phosphatase Gene Family AT4G26080 72.340 1.92e-41 139
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme251951g00001 K14497 - gmx:100789207 162.54