Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme25194g00001 GTTCAGAGGCTTTCTAATGTTGATGTTGTCAAATCTCCATTTCAATTTGTTCCTATATCTGATGTTGTTGGAGGTTCTTATGACACTGATTATTTAGTTGATGTTATTGGAGTTCTCACTGGTGTTGGATCTGAGAGAGAGATAACAAATCAGAATGGAAGTACAACTAAGCTCAATGTCATTGCCTTAGAGGCAGATGGGCATAAGATTCAGTGCACTTTGTTTGGACCCTATGTGGATGAGCTAAATACTTTTATTGCTGCTGGTGATTATAACAATGCTGTTGTTATTGTGCAACTTGCAAAAGCAAAAACATTTCAAGGTTAA 327 0.367 VQRLSNVDVVKSPFQFVPISDVVGGSYDTDYLVDVIGVLTGVGSEREITNQNGSTTKLNVIALEADGHKIQCTLFGPYVDELNTFIAAGDYNNAVVIVQLAKAKTFQG 108
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme25194g00001 108 Gene3D - 7 108 IPR012340 -
Trme25194g00001 108 Pfam Replication protein A OB domain 27 108 IPR031657 -
Trme25194g00001 108 SUPERFAMILY Nucleic acid-binding proteins 14 108 IPR012340 -
Trme25194g00001 108 CDD RPA1_DBD_B_like 34 108 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme25194g00001 Trme-Chr25194 706 1255 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme25194g00001 9 80 Core DNA Replication Machinery Family AT2G06510 32.877 9.15e-06 41.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme25194g00001 - - tpra:123915358 183.726