Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme251818g00001 ATTTCTGGTCCTGCTGACAAGCCCATGATTGTTGTTAACTACAAGAATGAGGAGAAGCAGTTAGCTGCTGAGGAGATTTCCTCCATGGTCCTATGGAAGATGCGTAAGACATCTGAGGCTTATCTCGGTTCCAACGTGAAGAATGCCGTTGTTACTGTCCCGGCATACTTCAACAACTCCCAGCGCCAGGCCACGAAGGATGCTGGACTCATTGCGGGCCTTAATGTCATGCGTGTCATCAACGAACCCACCGCTGCTGCCCTTGCCTATGGCCTTGACAAGAAGGTCAACGATGATGTTTGTAAGGTGTTGATTTTTTATCTTGGTGGTGGTACTTTTGATGTCACTCTTTTAACCATTGAAAATTGTATCTTCGAAG 379 0.467 ISGPADKPMIVVNYKNEEKQLAAEEISSMVLWKMRKTSEAYLGSNVKNAVVTVPAYFNNSQRQATKDAGLIAGLNVMRVINEPTAAALAYGLDKKVNDDVCKVLIFYLGGGTFDVTLLTIENCIFE 126
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme251818g00001 126 FunFam Endoplasmic reticulum chaperone BiP 6 105 - -
Trme251818g00001 126 Pfam Hsp70 protein 5 126 IPR013126 GO:0005524|GO:0140662
Trme251818g00001 126 Gene3D - 1 102 - -
Trme251818g00001 126 Gene3D - 103 126 - -
Trme251818g00001 126 SUPERFAMILY Actin-like ATPase domain 6 94 IPR043129 -
Trme251818g00001 126 PRINTS 70kDa heat shock protein signature 111 121 - -
Trme251818g00001 126 PRINTS 70kDa heat shock protein signature 49 69 - -
Trme251818g00001 126 PANTHER HEAT SHOCK PROTEIN 70KDA 2 126 IPR013126 GO:0005524|GO:0140662
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme251818g00001 Trme-Chr251818 2 380 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme251818g00001 3 126 Calmodulin-binding Proteins AT1G56410 78.400 2.78e-61 196
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme251818g00001 K03283 - sspl:121761843 194.512