Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme25173g00001 ATGCAGGGAACAGAAACTGTTGAGGCACTGATTTTGAACATGCAAAGAACAGGCAGAGTTAGCTTTAGTACTAATGTTTTCCAAGACATGAAGAAACTGAGACTTTTACAACTTGATCGTGTTGACCTCACTGGAGATTTTGGGTATCTTTCCAAACAACTGAGATGGGTCAATTGGCAACGATCTACCTTCAACTCTGTACCCAATGACTTTGATCAGGAAAATCTCGTTGCTTTTGAATTAAAACATAGCAATGTTAAACAAGTTTGGAAGGAAGCCAAGTTTTTGCAGAAGCTAAAAATTCTCAATCTCAGTCATTCCAGNCACTTGCAAAGCACCCCCGACTTTACAAAATTACCGAATCTAGAAAAACTCATTATGAAGGATTGTCCAAGTTTATCCAATATACACCCGTCCATTGGAGATCTCAAGAATCTTCTTCTCATAAATTTGAAGGACTGTTCAAGTCTTGTCAATCTCCCAAGAAAGATGTATAAATTGAGAACAGTGAAAACTCTCATCATTTCTGGTTGTTCAAAGATTGTCAAATTGGAAGAAGATATAGCGCAAATGAAATCCTTGACAACTCTAATTGCAGCAAACACTGGTGTCAAACAA 618 0.3738 MQGTETVEALILNMQRTGRVSFSTNVFQDMKKLRLLQLDRVDLTGDFGYLSKQLRWVNWQRSTFNSVPNDFDQENLVAFELKHSNVKQVWKEAKFLQKLKILNLSHSXHLQSTPDFTKLPNLEKLIMKDCPSLSNIHPSIGDLKNLLLINLKDCSSLVNLPRKMYKLRTVKTLIISGCSKIVKLEEDIAQMKSLTTLIAANTGVKQ 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme25173g00001 206 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 13 187 IPR044974 GO:0006952
Trme25173g00001 206 SUPERFAMILY L domain-like 11 202 - -
Trme25173g00001 206 Gene3D Ribonuclease Inhibitor 5 205 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme25173g00001 Trme-Chr25173 150 878 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme25173g00001 3 194 WRKY Transcription Factor Family AT4G12020 35.096 1.00e-23 96.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme25173g00001 - - tpra:123923836 355.91