Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme25170g00001 GAGGATTTGCGCAGAGTGATGGACATGCTTTCTGTGAGACAACAACATGCACGTACGCTGCTTATTTATCATCGTTGGGATGTGGAAAATTTGTTTGAAGTTTATGTAGAAAGAGGGAAGGCGTTTATGTTTGCTCAGGCTGGTGTTAGTGTGGATGAATGTCGTGACTCTGACTCATCGGTTAGTGCGTTAGTAATGTGTGAAATCTGCATGGACGACGTTCCTAGTGATGAAGCAACAAGAATGGACTGTGGTCACTGCTTTTGCAACACTTTAAGCAGTGAGTTAGGATCTGCATCAGCCTGTTTTTATGCCCTTATCAAAGACTGA 330 0.4333 EDLRRVMDMLSVRQQHARTLLIYHRWDVENLFEVYVERGKAFMFAQAGVSVDECRDSDSSVSALVMCEICMDDVPSDEATRMDCGHCFCNTLSSELGSASACFYALIKD 109
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme25170g00001 109 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 61 96 IPR013083 -
Trme25170g00001 109 SUPERFAMILY RING/U-box 64 90 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme25170g00001 7 91 ARIADNE family AT2G16090 53.409 1.49e-22 89.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme25170g00001 K11968 - gmx:100783343 157.918