Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme251565g00001 ATGGATGACTTCCGTCGTGCAGACTACATAAACACACCAGTTAAGCCGGAGAAGTCTTCTTGGGATGCCATGGAATCAAGGGCACATAAATTGGAAAACTGGCAAATGAAGAGATTTCAAACTGAAATGTTGCCCCCAAAATCGGCTAAACCCATTCCAGTTACTCACAATAGATTATTGTCTCCCATCAAAAGTAATGGTTATCTGCCTCAGAAGAATGTAGTTCAGATAATGGAGGCGGCTGCTAAGATAATT 255 0.4157 MDDFRRADYINTPVKPEKSSWDAMESRAHKLENWQMKRFQTEMLPPKSAKPIPVTHNRLLSPIKSNGYLPQKNVVQIMEAAAKII 85
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme251565g00001 85 PANTHER PHOSPHATIDYLINOSITOL N-ACETYLGLUCOSAMINYLTRANSFERASE SUBUNIT P DOWN SYNDROME CRITICAL REGION PROTEIN 5 -RELATED 18 85 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme251565g00001 Trme-Chr251565 1 255 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme251565g00001 2 85 TRM (TON1 Recruiting Motif) Superfamily AT3G05750 48.810 2.30e-22 87.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme251565g00001 - - tpra:123890979 166.007