Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme25134g00001 ATGCCATATTTTTCTAATTTGCAGGCATTGCTTCATGTTATATATTGGGACTCATTGCCTGACATGCAAGAGCTTACTGGGATTAACTCAAAATGGGCAACTACCTTGATGGCTCAGCATCTGCTAGCAGCAGCTGATCGGTATGGCTTAGATAGACTTAGGCTGATGTGTGAAGCAAGTCTATGTGAAGATGTTGCAATAAACACCGTGGCTACAACTTTAGCTTTGGCAGAGCAGCACCATTGTTTCCAGCTGAAAGCAGTCTGTCTGAAATTCATTGCAAGGCCTGAAAATCTCAGAGCTGTGATGCAAACTGATGGTTTCGAGTATTTGAAGGAAAGTTGTCCATCTGTTTTGACTGAGCTTTTGGAGTACGTGGCTAGATTTACTGAGCATTCGGACTTCCTGTGCAAGCATAGGAACGAAGCAATACTTGATGGCAGCGATGTAAATGGAAGGCGG 462 0.4372 MPYFSNLQALLHVIYWDSLPDMQELTGINSKWATTLMAQHLLAAADRYGLDRLRLMCEASLCEDVAINTVATTLALAEQHHCFQLKAVCLKFIARPENLRAVMQTDGFEYLKESCPSVLTELLEYVARFTEHSDFLCKHRNEAILDGSDVNGRR 154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme25134g00001 154 Gene3D - 65 142 - -
Trme25134g00001 154 PANTHER BTB/POZ AND MATH DOMAIN-CONTAINING PROTEIN 1 8 123 IPR045005 GO:0016567
Trme25134g00001 154 Pfam BTB/POZ domain 5 63 IPR000210 GO:0005515
Trme25134g00001 154 Gene3D Potassium Channel Kv1.1; Chain A 3 59 IPR011333 -
Trme25134g00001 154 CDD BACK_AtBPM-like 62 125 IPR034090 -
Trme25134g00001 154 SUPERFAMILY POZ domain 7 64 IPR011333 -
Trme25134g00001 154 FunFam BTB-POZ and math domain 1 65 142 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme25134g00001 Trme-Chr25134 254 1163 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Trme25134g00001 BTB 6.9e-05 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme25134g00001 K10523 - gmx:100799666 291.967