Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Trme2510g00001 | ATGGTGGCCTACAAATCGGCCATATCTTACCATCAGAATGACATAGAAGGAAAAGTTATTGTTGATGTCGGCTGTGGCACGGGTATTTTGTCGATTTTGTGTGCAAGGGCTGGAGCTAGGAAGGTTTATGCCATTGAGGCGTCTGGGATGGCTCTACATGCTGAAACCATTGTAAAAGTCAATGGATTGTCTGATGTTATAAAGGTGTTGCATTGCAAAGTTGAG | 225 | 0.4356 | MVAYKSAISYHQNDIEGKVIVDVGCGTGILSILCARAGARKVYAIEASGMALHAETIVKVNGLSDVIKVLHCKVE | 75 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Trme2510g00001 | 75 | Pfam | Ribosomal protein L11 methyltransferase (PrmA) | 15 | 69 | - | - | |
| Trme2510g00001 | 75 | PANTHER | PROTEIN ARGININE N-METHYLTRANSFERASE | 3 | 75 | IPR025799 | GO:0016274|GO:0018216 | |
| Trme2510g00001 | 75 | Gene3D | Vaccinia Virus protein VP39 | 1 | 75 | IPR029063 | - | |
| Trme2510g00001 | 75 | CDD | AdoMet_MTases | 20 | 75 | - | - | |
| Trme2510g00001 | 75 | SUPERFAMILY | S-adenosyl-L-methionine-dependent methyltransferases | 4 | 75 | IPR029063 | - | |
| Trme2510g00001 | 75 | ProSiteProfiles | SAM-dependent methyltransferase PRMT-type domain profile. | 1 | 75 | IPR025799 | GO:0016274|GO:0018216 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Trme2510g00001 | Trme-Chr2510 | 210 | 702 | Dispersed |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Trme2510g00001 | 3 | 75 | C2H2 Transcription Factor Family | AT3G12270 | 43.750 | 2.55e-12 | 58.2 |