Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme25027g00001 AAAGTATTTCTCAGGGCTGGCCAAATTGGTGTTTTGGACTCCAAACGTGCTGAGGTTTTGGACGACGTGGCTAAGTGTATTCAGTGCCAACTGAGGACATTTATTACACGCAGACATTTCATTTCAGTAAGCGCAGCTGCAGTTTCTCTTCAGGCATGCTGCAGGGGATACATTGCCCAGAAGATGTATGCAGCTAAAAGGGAAACAGCAGCAGCTATCGCCGTGCAAAAGTATATACGTATGTGGCTAACAAGGCTTGCACACATGAAACTATATTCTTCTGCTATTAGCATACAATCACATGTTCGAGGTTTCATTACTCAACAAAGATTCTTGCATGGAGAAGAACATAGAGCTGCTATATCTGTTCAGGTCAGCTTTCCGGCGATATCTTGCTTCAGTTGTGGCAATACAATGTCTATGGCGGTGTAG 432 0.4398 KVFLRAGQIGVLDSKRAEVLDDVAKCIQCQLRTFITRRHFISVSAAAVSLQACCRGYIAQKMYAAKRETAAAIAVQKYIRMWLTRLAHMKLYSSAISIQSHVRGFITQQRFLHGEEHRAAISVQVSFPAISCFSCGNTMSMAV 143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme25027g00001 143 PANTHER MYOSIN 1 118 - -
Trme25027g00001 143 Gene3D - 66 122 - -
Trme25027g00001 143 ProSiteProfiles IQ motif profile. 91 120 IPR000048 GO:0005515
Trme25027g00001 143 Pfam IQ calmodulin-binding motif 45 61 IPR000048 GO:0005515
Trme25027g00001 143 Pfam IQ calmodulin-binding motif 24 40 IPR000048 GO:0005515
Trme25027g00001 143 Pfam IQ calmodulin-binding motif 69 86 IPR000048 GO:0005515
Trme25027g00001 143 Pfam IQ calmodulin-binding motif 93 111 IPR000048 GO:0005515
Trme25027g00001 143 Gene3D - 1 62 - -
Trme25027g00001 143 ProSiteProfiles IQ motif profile. 44 72 IPR000048 GO:0005515
Trme25027g00001 143 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1 67 IPR027417 -
Trme25027g00001 143 SMART iq_5 90 112 IPR000048 GO:0005515
Trme25027g00001 143 SMART iq_5 42 64 IPR000048 GO:0005515
Trme25027g00001 143 SMART iq_5 19 41 IPR000048 GO:0005515
Trme25027g00001 143 SMART iq_5 67 89 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme25027g00001 Trme-Chr25027 1 1244 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme25027g00001 1 124 Myosins gene family AT4G33200 55.645 2.29e-40 141
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme25027g00001 K10357 - gmx:100790815 185.267