Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme25021g00001 GAGAAGGACATGAACAGTAACAATTTCACTCCTTTTGGAGGGGGGCAAAGGCTGTGTCCTGGCCTTGACTTGGCCAGGTTGGAAGCTTCCATCTTTTTACACCACCTTGTTACTCAGTTCAGATGGTATGCTGAAGAAGATACAATAGTGAACTTCCCTACAGTAAGAATGAAAAGAAGGATGCCTATCTTAGTAAAGAGAGTGTAA 207 0.43 EKDMNSNNFTPFGGGQRLCPGLDLARLEASIFLHHLVTQFRWYAEEDTIVNFPTVRMKRRMPILVKRV 68
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme25021g00001 68 SUPERFAMILY Cytochrome P450 4 66 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme25021g00001 68 PANTHER CYTOCHROME P450 26 6 49 - -
Trme25021g00001 68 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 12 21 IPR017972 GO:0005506|GO:0016705
Trme25021g00001 68 PRINTS E-class P450 group I signature 19 42 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme25021g00001 68 PRINTS E-class P450 group I signature 9 19 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme25021g00001 68 Gene3D Cytochrome P450 1 68 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme25021g00001 68 Pfam Cytochrome P450 3 49 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme25021g00001 Trme-Chr25021 248 756 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme25021g00001 6 67 Cytochrome P450 AT5G05690 63.492 2.01e-22 85.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme25021g00001 K12638 - gmx:100797868 130.568