Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme2497g00001 ATGTTGAAAATGATTAATGGAATGGCTGTTAACCGGTGGGCATGCATAAATTTCTCACGGAGCGTGCAAGATAGTGTTGCTCGCACTTTTTGTAATGACCTCGCTCTAATGTGTCAAGTATCTGGCATGGAATTTAATTTGGAGCCTGTTATACCTATCTACAATGCGAAGCCTGAGCAAGTGGAGAAAGCTTTGAAGCATGTTTACCATGTGTCAACAAACAAAACTAAAGGAAAGGAATTGGAGCTTTTGCTAGCAATATTGCCAGACAATAATGGTTCTCTCTATGGTGATCTCAAGCGAATCTGTGAAACTGACCTTGGTTTAATTTCACAATGCTGTCTTACAAAGCATGTCTTCAAAATCACTAAACAGTATTTAGCTAACGTGTCTCTGAAGATCAATGTTAAGATGGGAGGTAGAAACACCGTTCTTCTTGACGCTGTAAGCTATAGAATACCATTGGTTAGCGACATACCAACCATAATTTTTGGAGCAGATGTTACTCACCCTGAAAATGGAGAAGACACTAGCCCCTCAATAGCAGCCGTAGTAGCGTCCCAAGATTGGCCCGAAGTAACAAAATATGCTGGTTTAGTATGTGCTCAAGCTCATAGACAAGAACTTATACAAGATTTATACAAAACTTGGCATGATCCTGTTCGTGGCACGGTTAGTGGTGGCATGATAAGAGATTTACTGATTTCCTATAGAAAAGCAACGGGACAAAAGCCGCTACGAATTATATTTTACAGGGATGGTGTAAGTGAAGGACAATTTTACCAAGTTTTACTTTATGAGTTGGACGCAATCCGGAAGGCATGTGCATCCTTAGAACCAAACTATCAGCCTCCCGTAACTTTCATCATTGTACAAAAAAGACATCATACTCGGTTATTTCCAAACAACCATAGAGACAGGAGTAGTACAGATAAGAGTGGAAATATATTGCCTGGGACTGTTGTCGATACTAAAATTTGCCATCCAACGGAATTTGATTTTTATCTCTGCAGTCATGCTGGCATCCAGGGTACTAGTCGGCCAGCTCACTATCATGTTCTATGGGACGAAAACAATTTCACAGCAGATGGAATCCAATCTTTAACAAACAATCTTTGTTATACATATGCTAGGTGCACACGATCCGTATCCATTG 1156 0.4022 MLKMINGMAVNRWACINFSRSVQDSVARTFCNDLALMCQVSGMEFNLEPVIPIYNAKPEQVEKALKHVYHVSTNKTKGKELELLLAILPDNNGSLYGDLKRICETDLGLISQCCLTKHVFKITKQYLANVSLKINVKMGGRNTVLLDAVSYRIPLVSDIPTIIFGADVTHPENGEDTSPSIAAVVASQDWPEVTKYAGLVCAQAHRQELIQDLYKTWHDPVRGTVSGGMIRDLLISYRKATGQKPLRIIFYRDGVSEGQFYQVLLYELDAIRKACASLEPNYQPPVTFIIVQKRHHTRLFPNNHRDRSSTDKSGNILPGTVVDTKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADGIQSLTNNLCYTYARCTRSVSI 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme2497g00001 385 CDD Piwi_ago-like 3 385 IPR045246 -
Trme2497g00001 385 Gene3D - 2 149 - -
Trme2497g00001 385 FunFam Argonaute 10 1 146 - -
Trme2497g00001 385 ProSiteProfiles Piwi domain profile. 83 385 IPR003165 GO:0003676
Trme2497g00001 385 Pfam Piwi domain 84 385 IPR003165 GO:0003676
Trme2497g00001 385 SUPERFAMILY Ribonuclease H-like 75 385 IPR012337 -
Trme2497g00001 385 SMART Piwi_a_2 83 384 IPR003165 GO:0003676
Trme2497g00001 385 Pfam Mid domain of argonaute 4 69 IPR032473 -
Trme2497g00001 385 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 3 385 - -
Trme2497g00001 385 Gene3D - 152 385 IPR036397 GO:0003676
Trme2497g00001 385 FunFam protein argonaute 10-like 152 385 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme2497g00001 Trme-Chr2497 45 2466 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme2497g00001 3 385 Eukaryotic Initiation Factors Gene Family AT5G43810 92.167 0.0 758
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme2497g00001 K11593 - rvl:131324231 754.977