Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme249378g00001 GGTGAAGGTGAGTACTCTTCACCCAAACCAGTAGCAGCAACAAAAGTTGTTGCTACAACAAAAGATGTTGTTGCTACAAAGACAAATTCTTTTAACAGAATTTCTCTTACGGATCTGAGTTTYCCAAGTGCTACAACACTTTCAGATGATCTTTCAATATCTCTAGCTGGTTCTAATCTATATGTTTTTACACATGCTGAGCTTAAGATAATTACTCAGAGCTTTTCTTCTAGTAATTTTCTTGGTGAAGGAGGGTTTGGACCTGTTCATAAAGGGTTCATTGATGATAAGGTTAGAGCTGGACTTGAACCTCAACCTGTGGCTGTTAAGCTTCTAGATTTGGATGGTTCTCAAGGTCATAAAGAATGGCTGGTGA 376 0.383 GEGEYSSPKPVAATKVVATTKDVVATKTNSFNRISLTDLSFPSATTLSDDLSISLAGSNLYVFTHAELKIITQSFSSSNFLGEGGFGPVHKGFIDDKVRAGLEPQPVAVKLLDLDGSQGHKEWLV 125
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme249378g00001 125 PANTHER OS01G0588500 PROTEIN-RELATED 37 124 - -
Trme249378g00001 125 SUPERFAMILY Protein kinase-like (PK-like) 50 119 IPR011009 -
Trme249378g00001 125 Gene3D Phosphorylase Kinase; domain 1 45 125 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme249378g00001 Trme-Chr249378 1 376 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme249378g00001 57 123 Trihelix Transcription Factor Family AT1G26150 43.284 5.19e-10 53.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme249378g00001 - - mtr:25494166 199.519