Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme24901g00001 ATGTCAGCTACTATTGCAATGGCTGTGTTTGCCACAGCTCTAGCTATGTTACTCATTGCAGGGATTTTCCTTTACTTCTACCACAAATTTGTTCTTGCTAGATACCAAAGTAGAAGAAACAAAGTTACTACTAAAGGTTTTGTTCATGAGATGAACCATTATGAAGATATAAAAAGATTTGGTGGTAATGTGAAAGGACTAATTGTTGAAGAAAATGGTGTTGATGTTATTTATATGATGGATAAAGAAAGTAGACAAATGATATCTAGATTTCCAAATTGTATGTTCAATCCTAGTTTTGAAGAAGATGAAGAAGAAAAAGAAAAGATAATAGATGTATTGGTTCATAGGTCTAAAGTATCTAATCCTCATGAGATTCCATTTGCATGTGAATCTCCACTTCCACTTCCACTTCCACCACTACAAAAACCTTCAATGAATCTTGAGAAGAAGATTCACATGAGTGATTACAATCAACCACTACCTTCTCCTCCTCTTTCTCCTCCTCCTCCTCCTCCTCCACCTCCTCCTCCACCACCGGCTCCTSCAAAGAAAGAAATTCCRAAGGCRCCACTTCGTCCACCGCTACCACCTGGTCCACCTCCACTTCCAAAGTCTAAAGGCTTTATTTCATCCATGAAACCACCAGCAGCACCTAAAGGAAAAGCAAATATGAAAGAGGGTATTATAGGAGAGAGTTCAAGAGATAAAGGTCGTGGCCAAACAAGGCTTAAGCCTTTACATTGGGATAAGGTTGCAGCTGATGTTGATCATTCAACTGTGTGGGATCAGATCAATGATGGATCTTTTAG 812 0.3879 MSATIAMAVFATALAMLLIAGIFLYFYHKFVLARYQSRRNKVTTKGFVHEMNHYEDIKRFGGNVKGLIVEENGVDVIYMMDKESRQMISRFPNCMFNPSFEEDEEEKEKIIDVLVHRSKVSNPHEIPFACESPLPLPLPPLQKPSMNLEKKIHMSDYNQPLPSPPLSPPPPPPPPPPPPPAPXKKEIPKAPLRPPLPPGPPPLPKSKGFISSMKPPAAPKGKANMKEGIIGESSRDKGRGQTRLKPLHWDKVAADVDHSTVWDQINDGSF 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme24901g00001 270 SUPERFAMILY Formin homology 2 domain (FH2 domain) 170 270 - -
Trme24901g00001 270 MobiDBLite consensus disorder prediction 161 205 - -
Trme24901g00001 270 PRINTS Proline rich extensin signature 132 148 - -
Trme24901g00001 270 PRINTS Proline rich extensin signature 162 174 - -
Trme24901g00001 270 PRINTS Proline rich extensin signature 177 198 - -
Trme24901g00001 270 PRINTS Proline rich extensin signature 200 216 - -
Trme24901g00001 270 MobiDBLite consensus disorder prediction 126 249 - -
Trme24901g00001 270 ProSiteProfiles Formin homology-2 (FH2) domain profile. 234 270 IPR015425 -
Trme24901g00001 270 PANTHER FORMIN-RELATED 4 270 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Trme24901g00001 270 MobiDBLite consensus disorder prediction 229 249 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme24901g00001 4 270 FH2 protein (formin) Gene Family AT1G70140 34.932 8.34e-23 95.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme24901g00001 - - tpra:123885767 412.149