Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme24866g00001 CCACTCGAGCTTCTAAAGATAACAGCTATTGTGAGCGGAAACACAGACACTTCAAAGCTTGCAGTCGAGGACACTGAAGATCATTTTAAGATAGAYTCRGACGAAACTGTTGCGGTTTATTCTCAATTTGCGCTTAGATGCAAGATTCAACAATCCGACCAACTTGAAACGGTCATGAGAGTGATTAGAACTATAAATCCAATAGTAATGGTTGTCGCCGAGATTGAAGCAAATCATAATTCTAAATCTTTTGTGAACCGTTTCATCGAAGCACTTTTCTACTTTAGTGCATTTTTCGATTGTTTGGAGGATTGTATGAAAGGCGACGAGAAAAACCGAATGATTATGGAATCAATGTATTTTAGTCATGGTATAAGGAATAATGTGGCTGAAGAAGGAGCTGAAAGAAAGAGTAGAAATGTGAAGATTGATGTGTGGAGAGCATTTTTTAGTAGATATGGAATGGTGGAGACAGAATTGAGTATGATATCTTTGTATCAAGCTGAATTGGTTGCTAAGAGATTTTCTTGTGGAAGTTCTTGCACATTTGATATGAATGGTCATTGTCTTCTTGTTGGATGGAAGGGAACACCAATTAATTCTGTTTCTGTTTGGAAATTTATTTGA 627 0.3668 PLELLKITAIVSGNTDTSKLAVEDTEDHFKIDSDETVAVYSQFALRCKIQQSDQLETVMRVIRTINPIVMVVAEIEANHNSKSFVNRFIEALFYFSAFFDCLEDCMKGDEKNRMIMESMYFSHGIRNNVAEEGAERKSRNVKIDVWRAFFSRYGMVETELSMISLYQAELVAKRFSCGSSCTFDMNGHCLLVGWKGTPINSVSVWKFI 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme24866g00001 208 ProSiteProfiles GRAS family profile. 1 206 IPR005202 -
Trme24866g00001 208 Pfam GRAS domain family 27 206 IPR005202 -
Trme24866g00001 208 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 25 201 IPR005202 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme24866g00001 35 207 GRAS Transcription Factor Family AT3G03450 32.948 1.23e-28 110
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Trme24866g00001 GRAS 7.6e-43 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme24866g00001 - - gmx:100798926 313.538