Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme24694g00001 GAGCGGACAGTTGCTGCCCTTGTATCCATGGGTGCAGATTGTGGAGCATTGACGGATCCATCTCCAGAATTTCCTTCTGGGAGAACAGCTGCAGATCTCGCATCTAGCAATGGGCACAAAGGACTCTCTGGTTTTCTTGCAGAGTCTTCATTAACCAGCCACCTTGAAGCCCTCACAGTGGATGATCAACAAAAAGGTGGTCTGCAAGAAGTTTTAGGAACGAAAGCAGTGCAGACAGTTTCGGAGCGAACTGCAACACCCGTCTATAGTGATATGCCTGATGCCCTCTGCCTTAAGGATTCTCTAACCGCTGTCCGTAATGCTACACAAGCTGCTGATCGCATACATCAAGTATTCAGAATGCAGTCCTTTCAGAGGAAGCAGTTAACTCAGTATGAGGATGATGAGTTTGGTTTGTTAGATCAGCGGGCTCTTTCCCTACTAGCTTCTAAGGCGTCCAAGTCAGGACAAGGAGATGGCTTAGTCAATGATGCTGCTACTCAAATACAGAAAAAGTACCGTGGTTGGAAGAAGAGAAAAGAATTCTTGATCATCCGTCAAAGAATTGTTAAAATCCAGGTTCAGTGA 588 0.4609 ERTVAALVSMGADCGALTDPSPEFPSGRTAADLASSNGHKGLSGFLAESSLTSHLEALTVDDQQKGGLQEVLGTKAVQTVSERTATPVYSDMPDALCLKDSLTAVRNATQAADRIHQVFRMQSFQRKQLTQYEDDEFGLLDQRALSLLASKASKSGQGDGLVNDAATQIQKKYRGWKKRKEFLIIRQRIVKIQVQ 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme24694g00001 195 Gene3D - 162 194 - -
Trme24694g00001 195 ProSiteProfiles IQ motif profile. 163 191 IPR000048 GO:0005515
Trme24694g00001 195 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR CAMTA 1 193 - -
Trme24694g00001 195 Pfam IQ calmodulin-binding motif 164 182 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme24694g00001 Trme-Chr24694 162 749 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme24694g00001 1 195 CAMTA Transcription Factor Family AT5G09410 69.543 1.54e-83 263
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme24694g00001 K21596 - gmx:100818124 289.656