Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme246459g00001 AAACCCACAAAGGTTGGATTGGAAGAGTCTCAGGAGCAGATCCACAAGATTAGGATCACTCTCTCCTCTAAACACGTCAAGAATCTCGAGAAGGTTTGCGCTGACTTGGTTCGTGGTGCGAAGGACAAGCATCTTAGAGTCAAGGGACCTGTCAGGATGCCTACTAAAGTTCTTCACATCACTACAAGGAAGACCCCTTGTGGTGAAG 208 0.476 KPTKVGLEESQEQIHKIRITLSSKHVKNLEKVCADLVRGAKDKHLRVKGPVRMPTKVLHITTRKTPCGE 69
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme246459g00001 69 PRINTS Ribosomal protein S10 family signature 16 29 IPR001848 GO:0003735|GO:0005840|GO:0006412
Trme246459g00001 69 PRINTS Ribosomal protein S10 family signature 51 66 IPR001848 GO:0003735|GO:0005840|GO:0006412
Trme246459g00001 69 PANTHER 30S RIBOSOMAL PROTEIN S10 FAMILY MEMBER 9 69 IPR001848 GO:0003735|GO:0005840|GO:0006412
Trme246459g00001 69 Pfam Ribosomal protein S10p/S20e 18 68 IPR027486 -
Trme246459g00001 69 Gene3D Ribosomal protein S10 domain 3 69 IPR036838 -
Trme246459g00001 69 SUPERFAMILY Ribosomal protein S10 16 68 IPR036838 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme246459g00001 1 69 Cytoplasmic Ribosomal Protein Gene Family AT3G47370 86.957 7.59e-38 120
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme246459g00001 K02969 - gmx:100817306 135.576