Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme246182g00001 ATGGCGCAGATTCAGGTTCAACATCAAACTCCAGCACCTGTTCCGACACCTTCAAACGGTGTTGTTACTGCTCCGAACGTGAATCAGTTCGTTACGACATCGTTGTACGTTGGTGATCTTGATTTGAATGTTAACGATTCTCAGCTTTACAATCTGTTTAATCA 164 0.4268 MAQIQVQHQTPAPVPTPSNGVVTAPNVNQFVTTSLYVGDLDLNVNDSQLYNLFN 54
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme246182g00001 54 SUPERFAMILY RNA-binding domain, RBD 12 54 IPR035979 GO:0003676
Trme246182g00001 54 ProSitePatterns Ribosomal protein S2 signature 1. 27 38 IPR018130 GO:0003735|GO:0005840|GO:0006412
Trme246182g00001 54 MobiDBLite consensus disorder prediction 1 20 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme246182g00001 Trme-Chr246182 1 164 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme246182g00001 1 54 Eukaryotic Initiation Factors Gene Family AT4G34110 47.541 3.07e-10 51.2