Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme24577g00001 GACGGTGACGAAAGCTCCGGAGAAATTAAAGGAAAGGGTCCTGGTGGCGGCGGCGGTGGCGGTGGTAGGGGTGATAAGCCAAAAGAAGAGTTTGGGAGTGGAGTGCAAGAACATGAGAAGAACAAGTTGGTTTTCTTTGAAGGAAGTTCTTATAATTTTGATCTTGAAGACTTACTTAGAGCTTCTGCTGAAGTTCTTGGAAAAGGTAGCTATGGTACCTCATATAAGGCTATATTGGAGGAAGCAATGACAGTTGTGGTGAAGAGGTTGAAAGAAGTTGTGGTAGGCAAAAAGGAGTTTGAACAACAGATGGAGATTATGGGAAGGGTTGGACAACATGCGAATGTTGTACCGCTTCGCGCTTATTATTATTCGAAAGACGAAAAGCTTATGGTTTATGACTATGTCCCAGCTGGCAACTTATCCACACTCTTACATGGAAGTCGATCAGGTGGTAGAACTCCATTAGATTGGGACTCGAGAGTAAAAATATCTCTTGGAACTGCAAGAGGACTTGCGCACATCCATTCTGTCGGAGGTACCAAATTAACACATGGAAATATCAAGTCCTCAAATGTCCTCCTCAACCAAGATAACGACGGCTGCATTTCTGATTTCGGCCTGACCTCACTTATGAACATTCCTGCAAACCCTTCTAGAGCTGCAGGTTATCGCGCGCCTGAGGTTATTGAAACCCGTAAACACTCTCATAAATCAGATGTCTACAGCTTTGGTGTCCTCCTTCTCGAA 750 0.444 DGDESSGEIKGKGPGGGGGGGGRGDKPKEEFGSGVQEHEKNKLVFFEGSSYNFDLEDLLRASAEVLGKGSYGTSYKAILEEAMTVVVKRLKEVVVGKKEFEQQMEIMGRVGQHANVVPLRAYYYSKDEKLMVYDYVPAGNLSTLLHGSRSGGRTPLDWDSRVKISLGTARGLAHIHSVGGTKLTHGNIKSSNVLLNQDNDGCISDFGLTSLMNIPANPSRAAGYRAPEVIETRKHSHKSDVYSFGVLLLE 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme24577g00001 250 PANTHER OS05G0588300 PROTEIN 34 250 - -
Trme24577g00001 250 MobiDBLite consensus disorder prediction 1 34 - -
Trme24577g00001 250 Gene3D Transferase(Phosphotransferase) domain 1 137 250 - -
Trme24577g00001 250 ProSiteProfiles Protein kinase domain profile. 60 250 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme24577g00001 250 SUPERFAMILY Protein kinase-like (PK-like) 64 250 IPR011009 -
Trme24577g00001 250 Pfam Protein kinase domain 63 250 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme24577g00001 250 FunFam pollen receptor-like kinase 1 28 135 - -
Trme24577g00001 250 Gene3D Phosphorylase Kinase; domain 1 28 135 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme24577g00001 Trme-Chr24577 1 1208 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme24577g00001 25 250 Receptor kinase-like Gene Family AT5G58300 76.549 1.26e-127 374
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Trme24577g00001 Pkinase 5.9e-32 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme24577g00001 - - gmx:100796171 426.017