Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme24549g00001 GAAAACCAGGACTTGTTGATCAAGTGCATATCACAAGATTTGGGATTTTCTGGTGGCAAACCTGTTGCTGCATGCGTCATATATAAATGCCTTCTACACTGGAGGTCATTTGAAGTTGAAAGAACAACAGTCTTTGATCGTATCATTCAAACAATAGCTTCAGCTGTTGAGGCCCAGGATAATACTGATGTATTAGCCTATTGGTTATCTAATACATCTACTTTATTGATGCTTCTCCAACGCACCCTTAAAGCAAGTGGAGCTGCTAACTTAACACCACAACGCCGAAGAACAGCCTCATCTTCTCTGTTTGGAAGAATGTCTCAAGGGCTAAGGGCATCTCCTCAAAGTGCTGGATTGCCATTTATAAACGGTCGAGGTCTTAGTAGACTTGATGGTTTACGACAAGTAGAAGCAAAATATCCAGCACTTCTGTTTAAGCAACAGCTTACTGCCTTCCTTGAGAAATTATATGGAATGATACGAGACAACCTGAAAAAGGAGATATCCCCATTACTTGGACTGTGTATACAG 534 0.4101 ENQDLLIKCISQDLGFSGGKPVAACVIYKCLLHWRSFEVERTTVFDRIIQTIASAVEAQDNTDVLAYWLSNTSTLLMLLQRTLKASGAANLTPQRRRTASSSLFGRMSQGLRASPQSAGLPFINGRGLSRLDGLRQVEAKYPALLFKQQLTAFLEKLYGMIRDNLKKEISPLLGLCIQ 178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme24549g00001 178 ProSiteProfiles Dilute domain profile. 46 178 IPR002710 -
Trme24549g00001 178 PANTHER MYOSIN 1 170 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme24549g00001 Trme-Chr24549 401 1153 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme24549g00001 1 178 Myosins gene family AT5G20490 84.270 1.19e-100 315
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme24549g00001 K10357 - gmx:100804820 336.265