Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme2452g00001 ATGTTGGAGTCAATAACTCAGAGCAACATTGATGGCACATTATCATTGGACAACTTGCAAAAATTGCTTCGTAAACAATTAACTGGTAAGAGATACTTGTTAGTTATGGATGACATTTGGAATGAGAGTTTTGAAAAATGGGATCAATTGAGGACTTACTTAATGTGTGGTGCTCAAGGCAGTAAGATTTTAGTGACAACTCGTAGTAAAACCGTGGCACAAACAATGGGCGTAAGTGACCCCTATGTTTTGAAGGGTTTGACTCCAGAAGAATCATGGGGTTTGTTAAAGAAGATTACTTTCAGGGATGATACCGTTGGATTGAATCGATCTCTTGATTCAATTGGTAAGAAGATAGCTAAAAAGAGCAGTGGTGTTCCACTAGCAATAAAAACACTAGGAGGCCTATTACAGGGTAAAAGTGAAGGAAGGGAATGGACTGATGTTTTACAAGGTGCCTTTTGGAAATCATGTGAAGTTGAAGAAAGCATCATGCCAATGTTGAAACTGAGTTACCAAAAACTGTCTCCTCAACTACGACAATGTTTTGCTTACTGCTCTTTATATCCTAAGGATTGGGAAATAAAGAAGGATGAGTTGATTCAACTATGGATGGCACAAGGTTATCTCGAATGTTCAGATGAAAAGCAGCACATGGAAGACATCGGTAACCAATTCGTGAAGACTTTCTTGATGAAGTCTTTTTTCCAAGATGCTAAAATTGATGATCGTGGTGATATAGATACTTGCAAAATGCATGATTTAATACATGATCTTGCAATGAAAGTAGCCGGTAATGATTGTTGTTACGTGAACAGTGATACAAAAAGACTTGAAGGAAGTCCCATTCATATAATGTTGAAAAGTGATGCTTTTGGTTTGTTGGAGTCATTGGATACAAGTAGGATGCGGACTTTAATTTTGCTGAGAACCTTATCAAAGAAGTTGAATGAGGAAGAATTATCTGTCATCTCAAAATTCAAATACTTGCGTGTTTTGAAGTTGAAGCTATCAGATTGTTCTTTAAGTTTGAAATATCTCCCACCATTGGAGCGTCTCCCGTTTCTTAAGTCACTTAGTATATTTCGTCTTAATCAATTGGAATTCATCTATTATGAAGAGCCTCTTTTATCCGAATCATTTTTCCCATCTTTGGAGAAACTCACAATTGTCATGTGTTATCAGCTGAGGGGATGGAGGAGGATGAGCGGTGATGTCAATGATGATGATGATAACTCTTCAGAGTCATACCATCTCTCCTTTCCTCGTCTTTCTGAATTAGTTATTTCTCAATGTTCAAGGTTGACTCATATGCCTACTTTTCCAAAACTTGATGAGCATTGGATTTAA 1350 0.3719 MLESITQSNIDGTLSLDNLQKLLRKQLTGKRYLLVMDDIWNESFEKWDQLRTYLMCGAQGSKILVTTRSKTVAQTMGVSDPYVLKGLTPEESWGLLKKITFRDDTVGLNRSLDSIGKKIAKKSSGVPLAIKTLGGLLQGKSEGREWTDVLQGAFWKSCEVEESIMPMLKLSYQKLSPQLRQCFAYCSLYPKDWEIKKDELIQLWMAQGYLECSDEKQHMEDIGNQFVKTFLMKSFFQDAKIDDRGDIDTCKMHDLIHDLAMKVAGNDCCYVNSDTKRLEGSPIHIMLKSDAFGLLESLDTSRMRTLILLRTLSKKLNEEELSVISKFKYLRVLKLKLSDCSLSLKYLPPLERLPFLKSLSIFRLNQLEFIYYEEPLLSESFFPSLEKLTIVMCYQLRGWRRMSGDVNDDDDNSSESYHLSFPRLSELVISQCSRLTHMPTFPKLDEHWI 449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme2452g00001 449 SUPERFAMILY L domain-like 237 436 - -
Trme2452g00001 449 Pfam NB-ARC domain 15 173 IPR002182 GO:0043531
Trme2452g00001 449 PANTHER DISEASE RESISTANCE PROTEIN RP 17 410 IPR044974 GO:0006952
Trme2452g00001 449 FunFam Probable disease resistance protein At1g63360 172 262 - -
Trme2452g00001 449 PRINTS Disease resistance protein signature 26 40 - -
Trme2452g00001 449 PRINTS Disease resistance protein signature 419 435 - -
Trme2452g00001 449 PRINTS Disease resistance protein signature 123 137 - -
Trme2452g00001 449 Gene3D - 86 171 IPR042197 -
Trme2452g00001 449 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 11 186 IPR027417 -
Trme2452g00001 449 Gene3D Ribonuclease Inhibitor 267 446 IPR032675 -
Trme2452g00001 449 Gene3D - 172 263 IPR036388 -
Trme2452g00001 449 Gene3D - 1 81 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme2452g00001 Trme-Chr2452 397 2088 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme2452g00001 22 263 WRKY Transcription Factor Family AT5G45050 25.506 1.41e-07 52.4