Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme244931g00001 GAGCTTCGATGGAGTGGAGTTGCCATCGAAGACTGGTGGAGAAACGAACAATTTTGGGTGATTGGAGGTGTATCGGCGCATCTTTTTGCAGTGTTTCAAGGTCTTCTAAAAGTTCTTGCTGGAGTAGACACAAACTTCACTGTCACAGCAAAAGCAGCAGATGATGCCGAATTCGGAGAATTATATCTCTTCAAATGGACAACACTTCTCATTCCACCAACAACTCTTATAATCTTGAACATTGTTGGCGTTGTTGCCGGTGTCTCTGATGCAATAAATAGTGGTTCTGGTTCATGGGGACCTTTATTTGGGAAACTGTTCTTTGCATTTTGGGTCATTGTTCATTTATATCCTTTCCTTAAAGGTCTAATGGGAAAACAAAATAG 386 0.4119 ELRWSGVAIEDWWRNEQFWVIGGVSAHLFAVFQGLLKVLAGVDTNFTVTAKAADDAEFGELYLFKWTTLLIPPTTLIILNIVGVVAGVSDAINSGSGSWGPLFGKLFFAFWVIVHLYPFLKGLMGKQN 128
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme244931g00001 128 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 1 127 - -
Trme244931g00001 128 Pfam Cellulose synthase 1 128 IPR005150 GO:0016020|GO:0016760|GO:0030244
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme244931g00001 Trme-Chr244931 1 386 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme244931g00001 1 128 Cell Wall Biosynthesis AT5G17420 84.375 2.43e-77 244
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme244931g00001 K10999 - oeu:111393442 252.292