Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme24467g00001 ATGATTGGAACTCCAATTTGTATTCCTTCCCAAGAGTTCATTGATATTGGTCGCATTGCCTCCATTGAGAATAACCATAAACCGGTTGATTATGCGAAGAAAGGGCAGAAAGTAGCCATTAAGATTGTTGGCAGCAATTCTGAGGAACAGCAGAAAATGTTTGGGAGGCATTTTGAGATTGATGATGAGCTTGTAAGCCATATTTCGCGGAGATCTATTGATATTCTCAAAACTAATTATCGG 243 0.3909 MIGTPICIPSQEFIDIGRIASIENNHKPVDYAKKGQKVAIKIVGSNSEEQQKMFGRHFEIDDELVSHISRRSIDILKTNYR 81
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme24467g00001 81 Gene3D Translation factors 1 81 - -
Trme24467g00001 81 SUPERFAMILY Translation proteins 2 80 IPR009000 -
Trme24467g00001 81 PANTHER TRANSLATION INITIATION FACTOR IF-2-RELATED 2 81 IPR015760 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme24467g00001 Trme-Chr24467 49 1028 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme24467g00001 2 81 Eukaryotic Initiation Factors Gene Family AT1G76810 87.500 8.71e-43 145
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme24467g00001 K03243 - gmx:100814640 161.384