Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme24446g00001 GACATTGGTGCTTTGCATCTCATACCAAAGGAGTTGTCATTGAAGATTGTTAGCAAAATTGAAGCTGGAGAAAGGTTTGTTGTGTATGTAGTGATTCCAATGTGGCCAGAAGGTATACCTGAAAGTGCCTCAGTTCAGGCAATATTAGATTGGCAAAGAAGGACCATGGAGATGATGTATTCTGACATTGCTGATGCCATAAAAAAGAAGAACATTGAAGCACACCCTCGCGATTATTTGACATTTTATTGCCTTGGCAAAAGGGAAAGTAAGAAAGATGGAGAGTATACTCCTCCAGAGGAACCGGCGCCTAACAGTGACTATCATAGAGCGCAAAAGTCTAGGAGGTTCATGATCTATGTTCATTCCAAGATGATGATAGCGTCGAAAATTGTTCTAAACTCTAACAACGATTGA 417 0.4053 DIGALHLIPKELSLKIVSKIEAGERFVVYVVIPMWPEGIPESASVQAILDWQRRTMEMMYSDIADAIKKKNIEAHPRDYLTFYCLGKRESKKDGEYTPPEEPAPNSDYHRAQKSRRFMIYVHSKMMIASKIVLNSNND 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme24446g00001 138 SUPERFAMILY Phospholipase D/nuclease 10 128 - -
Trme24446g00001 138 PANTHER PHOSPHOLIPASE D 1 128 IPR015679 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme24446g00001 Trme-Chr24446 2 538 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme24446g00001 1 137 Phospholipase D Gene Family (Wang group) AT5G25370 72.662 1.06e-65 210
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme24446g00001 K01115 - psom:113341011 221.476