Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme24443g00001 ATGCATGAGCAAATGAATGAATTTGATTTAAGTAATGGCTTTACCGATATAATTGCTCCCTTTTATAATAGTGCCCTTGGTCAAGCTGCTCCAAACCTTGGTTCCATTGCTAAAGGCCGTGCAGCAGCAGCCAATATCATGAACATGATTGCATCCTTTTCAGACTCATCTAAAAGGTTGGATGAAGGCACTGTTTTGCCACAAGTAGCAGGGAAAGTTGATTTTTGTGAGGTCTGCTTTGCTTACCCCTCAAGATGCAATATGATCTTTGAGAATTTGAGTTTCTCAGTGAATGCTGGGAAGACTGTAGCAGTTGTTGGTCCAAGGGGTAAGATACTGTTGGATGGACATGACTTAAAGAATGTTCAATTGAGATGGTTGAGAGAGCAAATGGGTTTGGTGAGTCAGGAACCAGCACTATTTGCCACTACAATAGCTGGAAACATTTTATTTGGAAAAGAAGATTCCGACATGAATAAAATCATACTAGCTGCCAAGGCTGCAAATGCTCATTCTTTCATTACAGGATTACCTGAAGGCTATAATACTCAGGTGAATTATTAG 564 0.4007 MHEQMNEFDLSNGFTDIIAPFYNSALGQAAPNLGSIAKGRAAAANIMNMIASFSDSSKRLDEGTVLPQVAGKVDFCEVCFAYPSRCNMIFENLSFSVNAGKTVAVVGPRGKILLDGHDLKNVQLRWLREQMGLVSQEPALFATTIAGNILFGKEDSDMNKIILAAKAANAHSFITGLPEGYNTQVNY 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme24443g00001 187 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 64 186 IPR027417 -
Trme24443g00001 187 Gene3D - 63 109 IPR027417 -
Trme24443g00001 187 Gene3D - 110 185 IPR027417 -
Trme24443g00001 187 Gene3D ABC transporter type 1, transmembrane domain 25 62 IPR036640 GO:0005524|GO:0016020
Trme24443g00001 187 PANTHER ABC TRANSPORTER B FAMILY 23 110 IPR039421 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme24443g00001 Trme-Chr24443 324 1109 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme24443g00001 25 185 Calmodulin-binding Proteins AT2G36910 46.409 1.35e-39 141