Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme24425g00001 ATGGACATGTCTATTGTGAAACAAACCGGGACAAAGGCGGTGTCAATTGCCGTTGCTGGTATGATATTGCCCTTAATTGTTGGTGTTGGAATCTCCTTTTCCATGAGTGGTAAAAATGAAAATACAAATGAAATTAGCTATATTCTCTATATTGGTATTGTTCTATCTGTCACCTCCTTTCCTGTGCTTGCTCGAATGCTTGCCGAGCTCAAACTCATCAACACTGAGCTAGGCAAGCTTGCCCTTTCAACTTCCCTCATTAATGATGTGTGTGCTTGGGCTTTACTAGCTCTAGCTATTGCTTTATCAGAACAAAATTCAAGTACTTGGGCTTCTGTTTGGGTTGTAGCGTCAAATATGTTGTTTGTAGCTTTCTGTTTTTTTGTTGTTAGGCCATCAGTTACTTGGTTGATCAAAAGAACTCCTGAAGGAAAACAGTTTAGCGAGTTCCAAATATGCGTTGTACTCGTCGGTGTTGTGATCTCAGCTTTCATTACAGATGTTATTGGAACACATTCTATTTTTGGTGCTTTTGTTTATGGATTAGTGATTCCAAATGGTCCACTTGGAGCTGCTATAATTGAAAAGCTAGAAGATTTTGTTTCAGGGCTTTTACTCCCAATTTTTTATG 631 0.3883 MDMSIVKQTGTKAVSIAVAGMILPLIVGVGISFSMSGKNENTNEISYILYIGIVLSVTSFPVLARMLAELKLINTELGKLALSTSLINDVCAWALLALAIALSEQNSSTWASVWVVASNMLFVAFCFFVVRPSVTWLIKRTPEGKQFSEFQICVVLVGVVISAFITDVIGTHSIFGAFVYGLVIPNGPLGAAIIEKLEDFVSGLLLPIFY 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme24425g00001 210 Pfam Sodium/hydrogen exchanger family 1 210 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Trme24425g00001 210 PANTHER CATION/H + ANTIPORTER 1 209 - -
Trme24425g00001 210 Gene3D - 1 210 IPR038770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme24425g00001 Trme-Chr24425 1 631 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme24425g00001 1 210 Antiporter Super Family AT2G13620 60.000 1.14e-86 270
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme24425g00001 K26731 - ccaj:109788366 312.383