Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme24309g00001 ATGAGAGAAATGGATGAAAGCGAGTCTGTTGAGCTTTTTAGTTGGCATTCATTTAAGAAAGCGGGTCCTAGAGAAGATTTTGCTGAAATTTCCAAAAATGTTGTTGAGTATTGTGGGGGACTGCCGCTGGCTCTTGAAGTCCTCGGGTCATATTTGTTTGACAGACCGTTAACGGAGTGGAATTGTGTATTAGAGAAACTCAAGAGAATTCCCAATGATCAAGTACAAAGGAAGTTGAAAATAAGCTATGATGGTTTAAATGATGATATAGAGAGAGATATTTTCCTTGACATAGCTATTTTCTTTATTGGGATGGATAGAAATGATGTTGTGCATATATTAAATGGTTGTGGACTTTTTGCAGAAATTGGAATAAGTGTCCTTGTTGAGCGAAGCCTTGTAACTGTTGATAATAAAAACAAGCTTGGAATGCATGATTTGCTACGTGATATGGGAAGAGAAATTGTTCGTGATAAATCACCAAAGGAACTTGAGAAGCGTAGTAGGTTATGGTTTCATGAGGATGTCCTGGATGTATTGTTAGATCACACTGGAACAAAAGCTGTTGAGGGACTGACTTTGAAGCTTCCAGGTCTTAGTGCACAACGTTTTAGTACCAAAGCATTCAAGAAAATGAAGAAACTCAGATTGCTTCAACTTTCTGGTGTAAAACTTGATGGAGATTTTAAATATCTTTCAAGAAATTTGAGTTGGCTGTGTTGGAATGGATTTCCTCTAACATGCATACCTTCAAACTTTTATCAAAGAAACTTAGTGTCCATTGAGTTGGAAAACAGCAATATCAAGCTTGTGTGGAAAGAGATGCAG 828 0.372 MREMDESESVELFSWHSFKKAGPREDFAEISKNVVEYCGGLPLALEVLGSYLFDRPLTEWNCVLEKLKRIPNDQVQRKLKISYDGLNDDIERDIFLDIAIFFIGMDRNDVVHILNGCGLFAEIGISVLVERSLVTVDNKNKLGMHDLLRDMGREIVRDKSPKELEKRSRLWFHEDVLDVLLDHTGTKAVEGLTLKLPGLSAQRFSTKAFKKMKKLRLLQLSGVKLDGDFKYLSRNLSWLCWNGFPLTCIPSNFYQRNLVSIELENSNIKLVWKEMQ 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme24309g00001 276 Gene3D Ribonuclease Inhibitor 152 275 IPR032675 -
Trme24309g00001 276 SUPERFAMILY "Winged helix" DNA-binding domain 74 180 IPR036390 -
Trme24309g00001 276 Gene3D - 3 87 IPR042197 -
Trme24309g00001 276 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 7 270 IPR044974 GO:0006952
Trme24309g00001 276 Pfam NB-ARC domain 4 79 IPR002182 GO:0043531
Trme24309g00001 276 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 3 98 IPR027417 -
Trme24309g00001 276 PRINTS Disease resistance protein signature 210 226 - -
Trme24309g00001 276 PRINTS Disease resistance protein signature 38 52 - -
Trme24309g00001 276 SUPERFAMILY L domain-like 194 272 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme24309g00001 Trme-Chr24309 167 1219 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme24309g00001 4 272 WRKY Transcription Factor Family AT5G45050 34.007 1.38e-37 139
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme24309g00001 - - cam:101494533 446.047