Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme24291g00001 ATCATTGAGAATGATTTATTCAAGCAAGACTGGAGGTCTAGAGGAAAGGCTGAGCTAGCACAATATATGATTCTAAGATGGACCATTGCACTTCTTATTGGTTTAGGCACAGGCCTTGTTGCCTTCTTCAACAACATTGGAGTTGAGAATATTGCCGGTTTCAAGCTTCTCCTCACCAATGATCTCATGCTTAATCACAAATATTATAAGGCCTTTGCAGTTTATGCTAGTTGTAATATGGTTTTAGCCATTGCTGCAGCATCCCTCTGTGCCTACATTGCCCCTGCAGCAGCAGGATCTGGCATACCTGAGGTAAAGTCATATCTCAACGGCGTAGACGCTCCTTCTATATTGGCTCCAACCACCCTCTTTGTAAAG 378 0.4312 IIENDLFKQDWRSRGKAELAQYMILRWTIALLIGLGTGLVAFFNNIGVENIAGFKLLLTNDLMLNHKYYKAFAVYASCNMVLAIAAASLCAYIAPAAAGSGIPEVKSYLNGVDAPSILAPTTLFVK 126
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme24291g00001 126 PANTHER CHLORIDE CHANNEL PROTEIN CLC FAMILY MEMBER 1 126 - -
Trme24291g00001 126 SUPERFAMILY Clc chloride channel 4 126 IPR014743 -
Trme24291g00001 126 Gene3D Clc chloride channel 18 126 - -
Trme24291g00001 126 Pfam Voltage gated chloride channel 83 126 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme24291g00001 Trme-Chr24291 398 872 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme24291g00001 1 126 Ion Channels AT5G49890 72.222 5.78e-59 192
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme24291g00001 K05016 - qsa:O6P43_012129 196.052