Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme2425g00001 ATGTCGACTGAAGTACGGGATGAAGTTGATATTGATGAAATTGAACTTCTTACAAATGTTGATTTCCCTCAAATATTTGATAGTGATGATGATGCTTATAATTTTTACTCTTCGTTTGCACAAAGAAGTGGTTTCTCAATTAGACGTCATCACGTTTATAGAAACACTACTGATGAGGGAAATCCACAAACAGTTTACAAAAGAGAGTTCGTTTGCCATCGATCCGGGGTTTCTAAACCAGTCAAAGTTAATGAACTGGAAAGTCAAAGGAAACGGAAAGCTTCAAGGTGTAGTTGTAGTGCGAGATTGGTGGTTGCTAAAGAGACAATTGGATCGGAAGAAAAATGGGTGGTAATATATTTCAACAATGTCCACAACCATGATTTGTTAGATGAGAAAGAGGTTCAATTTCTCCCTGCTTATCGTAACATCCCGGTTGTTGACCAAAACCGTATACTAATGATGCATAAAGCTGGTTGTTCCATTAATGTCACAATGAGATTGCTTGAATTAGAGAAAGGAATAGATGTAGGTAGTCTACCATTTATGGATAAAGATATTAGGAATTTCCTTCAAAACCAAAATGGTATTGACAAACAAAATGATGCTTTAGATGTCTTGAAATTGTGTAAAGGGTTGAAAGAGTTAGATGATGCCTTCCAATATGATTACACAATAGATGAGAATAAGAAGTTGGAACACATTATTTGGGCATTTGGTGATTCAATCCGTGCATATGAATCTTTCGGGGATGTGGTTGTCTTTGATACTACTTATCGAATAAATCGTTATGATATGCCACTTGGAATATGGCTTGGAGTTGACAATCATGGGAATTCAGTTTTTTTTGGTTGTGTTCTATTACGAAATGAGAAGATTTCTTCCTTCACATGGGCTTTAAAGAATTTCCTAGCTTTTGTCAAAGGAAAGAATCCACAAACAATTCTTACAGATCAAGATCCCTCGCTTAAAGAAGCCATTGCAAATGAATTTCCGAACACAAAACATGCATTTTGCATATGGCACATCTTGGCAAAGTTGCCAAGTTGGTTTTCGTTTGTATTAGGTGCAAGATATAATGACTTTAAATCTGAGTTTTTCAAGGTGTACCATTTAGATTGTGAAGATGATTTTGAACAATATTGGAAATCCATGGTTGCACAATTTGGTCTAAGTTGGTGTTGCTGTCCAAATTAG 1197 0.3576 MSTEVRDEVDIDEIELLTNVDFPQIFDSDDDAYNFYSSFAQRSGFSIRRHHVYRNTTDEGNPQTVYKREFVCHRSGVSKPVKVNELESQRKRKASRCSCSARLVVAKETIGSEEKWVVIYFNNVHNHDLLDEKEVQFLPAYRNIPVVDQNRILMMHKAGCSINVTMRLLELEKGIDVGSLPFMDKDIRNFLQNQNGIDKQNDALDVLKLCKGLKELDDAFQYDYTIDENKKLEHIIWAFGDSIRAYESFGDVVVFDTTYRINRYDMPLGIWLGVDNHGNSVFFGCVLLRNEKISSFTWALKNFLAFVKGKNPQTILTDQDPSLKEAIANEFPNTKHAFCIWHILAKLPSWFSFVLGARYNDFKSEFFKVYHLDCEDDFEQYWKSMVAQFGLSWCCCPN 398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme2425g00001 398 Pfam MULE transposase domain 252 345 IPR018289 -
Trme2425g00001 398 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 24 392 IPR031052 GO:0006355
Trme2425g00001 398 Pfam FAR1 DNA-binding domain 34 130 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme2425g00001 Trme-Chr2425 815 2622 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Trme2425g00001 FAR1 2.3e-19 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme2425g00001 - - tpra:123894382 779.245