Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme242535g00001 ATGCTTGGGATAATCTATGGAGTCCTTAAACCTGAGAATATGTTGGTGAGAGAAGACGGTCATATAATGCTTTCAGATTTCGATCTCTCTCTAAGGTGCACCATCAGTACAACTCTGGTGAAGTCTTCAAACTGGATTGCCGAAACAAAAAGCTCAGAATACTGCATTCAGCCTGCCTGCATTCAGCCAACATGTGCAATGCAGCCAGACTGCATCCAAGCTGCATAA 228 0.4386 MLGIIYGVLKPENMLVREDGHIMLSDFDLSLRCTISTTLVKSSNWIAETKSSEYCIQPACIQPTCAMQPDCIQAA 75
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme242535g00001 75 Gene3D Transferase(Phosphotransferase) domain 1 1 74 - -
Trme242535g00001 75 SUPERFAMILY Protein kinase-like (PK-like) 2 44 IPR011009 -
Trme242535g00001 75 ProSiteProfiles Protein kinase domain profile. 1 75 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme242535g00001 75 PANTHER FLIPPASE KINASE 1-RELATED 1 65 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme242535g00001 Trme-Chr242535 72 299 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme242535g00001 1 73 AGC Kinase Gene Family AT3G27580 70.270 6.14e-32 114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme242535g00001 K08286 - pvy:116145221 126.716