Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme24205g00001 ATGCCTAACGACGATATTACGCATCCAACTCCTGATCTTACTGGATATATCACTGAGGGGCAGATATATATTGACCGGCAGTTGCACAATAGACAGATATATCCACCAATCAATGTCCTTCCATCGCTGTCTCGATTAATGAAGAGTGCCATCGGGGAGGGAATGACACGAAGGGATCACGCTGATGTGTCCAACCAGCTCTATGCAAATTATGCCATTGGAAAGGATGTCCAGGCAATGAAAGCCGTGGTCGGAGAAGAAGCACTTTCGTCTGAGGACCTGCTGTATCTGGAATTTCTCGACAAGTTTGAGAGGAAGTTTGTTGCCCAAGGAGCGTATGATACCCGCAACATCTTCCAGTCTCTAGATCTTGCATGGACTTTGCTTCGGATTTTCCCTCGCGAGCTTCTTCATCGTATACCGGCAAAGA 430 0.4698 MPNDDITHPTPDLTGYITEGQIYIDRQLHNRQIYPPINVLPSLSRLMKSAIGEGMTRRDHADVSNQLYANYAIGKDVQAMKAVVGEEALSSEDLLYLEFLDKFERKFVAQGAYDTRNIFQSLDLAWTLLRIFPRELLHRIPAK 143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme24205g00001 143 PANTHER V-TYPE PROTON ATPASE SUBUNIT B 1 143 IPR022879 -
Trme24205g00001 143 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1 50 IPR027417 -
Trme24205g00001 143 ProSitePatterns ATP synthase alpha and beta subunits signature. 35 44 IPR020003 GO:0005524
Trme24205g00001 143 Gene3D - 1 143 - -
Trme24205g00001 143 CDD ATP-synt_V_A-type_beta_C 54 143 - -
Trme24205g00001 143 Pfam ATP synthase alpha/beta family, nucleotide-binding domain 1 44 IPR000194 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme24205g00001 Trme-Chr24205 1 1123 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme24205g00001 1 143 Primary Pumps ATPases(2) AT4G38510 99.301 1.98e-102 300
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme24205g00001 K02147 - vvi:100243574 289.656