Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme24157g00001 ATGCTACCTGCATTACTCATTGGACTCAAAACCAGCAACATGTATGAAAGACTAACTAATATACTTATACAACAAAATGGAACCTTTAGATTCAAAGGACCATGGTTCACTAGTCTAAACCTTGTAGTAACCTCGGAACCGCAAAATGTAGAACATCTTCTCAAAACAAGGTTCACTAATTTCCCTAAAGGAAACTATGTCAAAGACACAGTTTCTGATTTACTTGGAGACGGTATTTTCGCTGTAGATAATGAAACATGGCAGAAACAAAGAAAAACAGCGAGTATCGAGTTTCATTCAACAAAGTTTAGGAAATTAACAATTGAGTCATTGTTTGAGCTTGTGAATAATAGGCTTATACCTGTTTTAGATTCATCTTTGAAGAAATCGGTTTCGATCGATCTTCAAGATATTTTGTTGAGATTAACTTTTGATAATGTTTGTATGATTGCTTTTGGTGTTGATCCTGGTTGTTTACAACCTCATTTACCTGTAATACCTTTTGCAGCAGCTTTTGAAGATGCAACAGAAGCTATTTTGCTTCGATTTCCGTCGCTGGCTTGTGTATGGAAGACTATGAGGTTTCTTAACTTAGATAAGTTCTTGAGGGATATATGTGTGAATTTTATATTAGCTGGGAGGGATACTTCTTCTGTTGCTTTAAGCTGGTTTTTCTGGTTGATAGATCAGAATCATGAAGTGGAGGAGAGAATATTAGAAGAGATTTGTAGGGTT 735 0.3551 MLPALLIGLKTSNMYERLTNILIQQNGTFRFKGPWFTSLNLVVTSEPQNVEHLLKTRFTNFPKGNYVKDTVSDLLGDGIFAVDNETWQKQRKTASIEFHSTKFRKLTIESLFELVNNRLIPVLDSSLKKSVSIDLQDILLRLTFDNVCMIAFGVDPGCLQPHLPVIPFAAAFEDATEAILLRFPSLACVWKTMRFLNLDKFLRDICVNFILAGRDTSSVALSWFFWLIDQNHEVEERILEEICRV 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme24157g00001 245 Pfam Cytochrome P450 35 179 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme24157g00001 245 Pfam Cytochrome P450 202 245 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme24157g00001 245 Gene3D Cytochrome P450 4 199 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme24157g00001 245 PANTHER CYTOCHROME P450 199 242 - -
Trme24157g00001 245 SUPERFAMILY Cytochrome P450 15 245 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme24157g00001 245 Gene3D Cytochrome P450 200 245 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme24157g00001 Trme-Chr24157 14 943 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme24157g00001 1 245 Cytochrome P450 AT5G23190 56.478 2.14e-113 334
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme24157g00001 K15402 - qsa:O6P43_032314 344.739