Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme241562g00001 ATGAAGATGGGTAGTTTGGTTATGAAGGAGGCATTTATGCTTAGGAGTCAACCTTTATCTTATAAACCCATGTTTGTTATAGCTCTTGACATTTCCAACAAGAAGGAGAATGTTGGTGTTAGGCTATTTAATGATATTGATAGGAACTACGACCCATTGAGTTTTGAGTATCTTTCGAGAGCTGTTTTTCCACAACTTGTGTTTCATCAGAGCGTGGTGGGTTGTAAATGCATCGATGAATGTGTGGAAGGATGCTTTTGTTTCACGAAGAATGGAAACTGA 282 0.383 MKMGSLVMKEAFMLRSQPLSYKPMFVIALDISNKKENVGVRLFNDIDRNYDPLSFEYLSRAVFPQLVFHQSVVGCKCIDECVEGCFCFTKNGN 93
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme241562g00001 93 PANTHER G9A, ISOFORM B 3 92 IPR043550 GO:0002039|GO:0016279|GO:0042054
Trme241562g00001 93 SMART preset_2 28 93 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Trme241562g00001 93 Pfam Pre-SET motif 31 91 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Trme241562g00001 93 Gene3D SET domain 3 93 IPR046341 -
Trme241562g00001 93 SUPERFAMILY SET domain 18 87 IPR046341 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme241562g00001 19 91 Su(var)3-9 homologs AT1G73100 31.169 2.14e-06 42.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme241562g00001 - K11420 gmx:100795514 139.043