Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme2413g00001 ATGGATTCGGTCATTCATAAACTTCCACAAGGTCAAAGGATATCAGATAAATTGAAAGAAGAAATTTTGAAGAAATTGACAGAACCTATTAGTACTAGAGAAGTTCGATACAAGAACTCGATAAGAAGAATCAAGTCTCTTCAAGAACCACTAGTAAGTTATTGTCAACAACAAGAGACGCATTCGCCGTTGAAAATCTTGAGACCTTCTCATCAAAGAATTTTTTCATTACCACCTGATCTTCAATCTTTTTCCTATGCTTCTATGAAAGAAGATATTTCTGATTTGAGTCAAGAAAATCTTGTCATTATAGATGACAATGATATGGTGATTATTAATAATGTGAAATCAGGATCAGATTTAATAATTGATGATTTTGAACATAGTAGTTTGAGAAATTGTGGAAATTTCAATGACCAAGATATTGAAGCAAATAAAGAATACAAGGCTGCAATACCAGCTTCAACATCAGATTCAAAATCTCAGCCAGCACCGATCGATAGACTGGATAATATAGCTCAAAAAATGGAGATTCTAAGCAAGAATTTGAACCATGAGATTCTTCATATTGATGTGGACACAAAATACAAAGATGAATTTAACTATGTGAAATATGTACTTGAAATATCTGGACTTACTAGTAATGAGAGCATTTCAGCATGGCATTCTAAAGACACTCCAATTGATCCATCATTATATGAAGAAATGGAAAATGATCCTGATTTTTGTG 730 0.3233 MDSVIHKLPQGQRISDKLKEEILKKLTEPISTREVRYKNSIRRIKSLQEPLVSYCQQQETHSPLKILRPSHQRIFSLPPDLQSFSYASMKEDISDLSQENLVIIDDNDMVIINNVKSGSDLIIDDFEHSSLRNCGNFNDQDIEANKEYKAAIPASTSDSKSQPAPIDRLDNIAQKMEILSKNLNHEILHIDVDTKYKDEFNYVKYVLEISGLTSNESISAWHSKDTPIDPSLYEEMENDPDFC 243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme2413g00001 243 Coils Coil 166 186 - -
Trme2413g00001 243 PANTHER PROTEIN TRM32 104 241 IPR044257 -
Trme2413g00001 243 Pfam Domain of unknown function (DUF4378) 199 239 IPR025486 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme2413g00001 180 243 TRM (TON1 Recruiting Motif) Superfamily AT5G02390 45.312 1.11e-09 56.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme2413g00001 - - mtr:25491599 283.108