Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme240992g00001 TATCAATTGGGTCGTCATGTCAATAAGTCCAACCTTGTTGATGTTGTTGGAGTCGTTAAGAATGTGTCTTCAACAATGAGAAATCGAAGGAAGAGCAACAACGAGAGTATTCCAAAGCGTGACATTACTATTGCTGATGAAACCAAGAAGACAGTTGTTGTGCCTTTGTGGGGAGATCTCAATTCTCGCAACTAA 195 0.4051 YQLGRHVNKSNLVDVVGVVKNVSSTMRNRRKSNNESIPKRDITIADETKKTVVVPLWGDLNSRN 64
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme240992g00001 64 SUPERFAMILY Nucleic acid-binding proteins 7 60 IPR012340 -
Trme240992g00001 64 Pfam Replication protein A OB domain 6 59 IPR031657 -
Trme240992g00001 64 Gene3D - 2 63 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme240992g00001 Trme-Chr240992 82 276 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme240992g00001 2 60 Core DNA Replication Machinery Family AT5G08020 67.797 3.07e-22 85.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme240992g00001 K07466 - gmx:100777091 80.8777