Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme24090g00001 TTTATCTCCTTAACTAACCTCACATTAGAGATCCGGAGCTGCAACGATGATGGGTTGAGCCTTCCTGATGCTAGATTGCGGTCAGTAAAGTCTACCACTGATGTTCTGACTCTCATGAAACTTGGCGAGGTTAACCGCGCAGTCAGTTCTACAGCAATAAACAATAGGAGTAGTCGTTCACACAGTGTACTTACTGTGCATATCAATGGCAAAGATACATCTGGCAACTCCATTCGAAGTTGCCTTCATTTAGTAGACCTTGCCGGAAGCGAAAGAGTTGACAAGTCTGAAGTCACAGGAGATAGACTTAAGGAAGCGCTATATATTAACAAGTCTCTTTCATGTTTGGGAGATGTGATCACAGCACTGGCACANAAGAATTCTCACATTCCTTACAGGAACAGCAAACTCACACTTCTTTTGCAGGACTCGTTAGGTGGACATGCTAAAACTTTGATGTTTGCACATGTGAGTCCCGAAGCAGATTCCTTTAGTGAAACAGTGAGTACTCTAAAATTTGCTCAGAGGGTTTCCACTGTGGAACTTGGCGCAGCYCGGATGAACAAAGAAAGCAGTGAAGTTATGCAACTTAAAGCACAGGTAAGAATGTCTACTTAA 618 0.4288 FISLTNLTLEIRSCNDDGLSLPDARLRSVKSTTDVLTLMKLGEVNRAVSSTAINNRSSRSHSVLTVHINGKDTSGNSIRSCLHLVDLAGSERVDKSEVTGDRLKEALYINKSLSCLGDVITALAXKNSHIPYRNSKLTLLLQDSLGGHAKTLMFAHVSPEADSFSETVSTLKFAQRVSTVELGAARMNKESSEVMQLKAQVRMST 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme24090g00001 205 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 8 201 IPR027417 -
Trme24090g00001 205 PRINTS Kinesin heavy chain signature 130 151 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Trme24090g00001 205 PRINTS Kinesin heavy chain signature 51 68 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Trme24090g00001 205 PRINTS Kinesin heavy chain signature 81 99 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Trme24090g00001 205 SMART kinesin_4 4 188 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Trme24090g00001 205 ProSiteProfiles Kinesin motor domain profile. 1 180 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Trme24090g00001 205 Gene3D Kinesin motor domain 3 205 IPR036961 -
Trme24090g00001 205 PANTHER KINESIN-LIKE PROTEIN KLP-3 10 199 IPR027640 GO:0003777|GO:0007018
Trme24090g00001 205 Pfam Kinesin motor domain 8 179 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme24090g00001 Trme-Chr24090 290 1123 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme24090g00001 7 180 Calmodulin-binding Proteins AT5G65930 47.429 2.91e-39 141