Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme240380g00001 AGGCTTTTCAACTTCACTGGAAAAGGTGATCAAGATCCATCGTTGAATCCAACTTATGCCAGTTTCTTGAAGACCAAGTGTCAAGGCCTAAGTGACAGAACCACAACAGTAGAAATGGATCCAAATGGCTCAACAAAATTTGATGGAAATTATTATCCTATCCTTTTACAGAACAAAGGTCTCTTCACATCAGATGCTACTCTTCTAACAACTAAGCAATCAAGAAACATTGTTAATGAATTGGTTTCACAGAACAAATTCTTCACTGAATTTGCACAGTCAATGCAGAGAATGGGAGCTATTGAGATTCTGTCAGGTTCAAATGGAGAAATTAGGAGGACGTGCTCTGTTGTTAATTAA 360 0.375 RLFNFTGKGDQDPSLNPTYASFLKTKCQGLSDRTTTVEMDPNGSTKFDGNYYPILLQNKGLFTSDATLLTTKQSRNIVNELVSQNKFFTEFAQSMQRMGAIEILSGSNGEIRRTCSVVN 119
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme240380g00001 119 PANTHER PEROXIDASE 25-RELATED 1 112 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trme240380g00001 119 PRINTS Plant peroxidase signature 38 53 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trme240380g00001 119 PRINTS Plant peroxidase signature 54 71 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trme240380g00001 119 PRINTS Plant peroxidase signature 93 106 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trme240380g00001 119 ProSiteProfiles Plant heme peroxidase family profile. 1 119 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trme240380g00001 119 SUPERFAMILY Heme-dependent peroxidases 1 119 IPR010255 GO:0004601|GO:0006979|GO:0020037
Trme240380g00001 119 Gene3D Peroxidase, domain 2 1 98 - -
Trme240380g00001 119 Pfam Peroxidase 10 82 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme240380g00001 Trme-Chr240380 1 360 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme240380g00001 1 119 Peroxidase AT4G11290 50.000 1.06e-34 120
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme240380g00001 K00430 - mtr:25499574 219.935