Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme240243g00001 ATGCTATTTCTAACATGGGTTGATCTTCTTGATCTTAATTCAATCCAATCTGTTATTCATGGTTGCCATGGTGTGTTCCACACAGCTTCCCCTGTCACTGACAATCCTGAAGAGATGTTGGAGCCAGCAGTGAATGGAACCAAGAACGTGATTATTGCGGCCGC 164 0.4451 MLFLTWVDLLDLNSIQSVIHGCHGVFHTASPVTDNPEEMLEPAVNGTKNVIIAAA 55
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme240243g00001 55 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 7 55 - -
Trme240243g00001 55 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 6 54 IPR036291 -
Trme240243g00001 55 Gene3D - 2 55 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme240243g00001 Trme-Chr240243 1 360 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme240243g00001 2 55 Monolignol Biosynthesis Gene Families AT1G80820 64.815 2.09e-17 70.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme240243g00001 K09753 - gmx:100796771 90.1225