Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme23994g00001 ATGCAAAACTTGATAGAGTTACACGATATCTTGGTGTTCTTGCTGAGAAAACCCGCAAATCAAGTTGCCCTTGAAACTGAAGCAAGAATATCACCACTGATCAATGAGAAAAAGAGATTGTTCAATGATTTATTGACATCTAAAGGAAGCATACGCATATTCTGTCGGACAAGGCCGTTATTTGAAGATGAAGGTCCTTCAGTTGTTGATTTTCCAGATGATCACACAATTCGTGTAAATACTGGTGATGATTCATTCGCTAACCCCAAAAAAGATTATGAATTTGATAAAGTTTATGGTCCTCATGTTGGACAAGCTGAGTTATTCAGTGATGTCCAACCACTGGTGCAGTCAGCTTTGGATGGATATAATGTTTCCATATTTGCCTATGGTCAAACCCATTCCGGAAAAACACACACTATGGTTACTCT 431 0.3828 MQNLIELHDILVFLLRKPANQVALETEARISPLINEKKRLFNDLLTSKGSIRIFCRTRPLFEDEGPSVVDFPDDHTIRVNTGDDSFANPKKDYEFDKVYGPHVGQAELFSDVQPLVQSALDGYNVSIFAYGQTHSGKTHTMVTL 144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme23994g00001 144 SMART kinesin_4 48 144 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Trme23994g00001 144 Gene3D Kinesin motor domain 15 143 IPR036961 -
Trme23994g00001 144 ProSiteProfiles Kinesin motor domain profile. 50 144 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Trme23994g00001 144 PANTHER KINESIN-LIKE PROTEIN KLP-3 29 141 IPR027640 GO:0003777|GO:0007018
Trme23994g00001 144 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 25 143 IPR027417 -
Trme23994g00001 144 Pfam Microtubule binding 36 142 IPR031852 GO:0008017
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme23994g00001 Trme-Chr23994 1 1162 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme23994g00001 37 141 Calmodulin-binding Proteins AT5G65930 42.202 1.87e-21 87.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme23994g00001 - - mtr:25502890 238.81