Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme239922g00001 TCTAGCTGTCCTTCTCATTTGCTTCACGACACAACCGATGATCGTGTGCTCGATCAAGTTGACAAGGACAACAAAGCCGAGACTGCTACAAGTTATCGGTTGTTTGGAATTGATCTTATAGATCATTCCAAAAATTCGGCTACTCTAGGGAAAGCATCATCGCATGTGGCAAACATAACTGGAGTTACCACTGAAGTTAGTTCCAGCACTTTGTCCAGCATTGATACTAGCCGTAGGTCTGACATCTCAAAGGCTGCTTCTATGGAGAAGAAACAAGAATCGCAACTAGTATCACCGAAGGAGACTCAAAGCAAGCAAACTTGTAGCAGAAGTCGCACCAAG 342 0.4415 SSCPSHLLHDTTDDRVLDQVDKDNKAETATSYRLFGIDLIDHSKNSATLGKASSHVANITGVTTEVSSSTLSSIDTSRRSDISKAASMEKKQESQLVSPKETQSKQTCSRSRTK 114
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme239922g00001 114 MobiDBLite consensus disorder prediction 64 114 - -
Trme239922g00001 114 MobiDBLite consensus disorder prediction 89 114 - -
Trme239922g00001 114 MobiDBLite consensus disorder prediction 64 81 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme239922g00001 Trme-Chr239922 3 344 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme239922g00001 11 114 B3 DNA Binding Superfamily AT4G23980 41.905 1.37e-10 55.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme239922g00001 K14486 - gmx:100779003 119.012