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Gene search
Sequence information
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Gene
Cds
Cds_length
GC_content
Pep
Pep_length
Trme2398g00001
ATGACCGTTTTTCTTGGTCAATTAGATTTCATGGCATGGTTTGAAACTGGAGTTACAGATTCTTATGGTGATAGTGGTGGGGATTCATGGACTCCAGCGAGCTCTACTTTCAGCTACAATATTGCAAGCTCCAATGATGTTGTTGGGCGTGAGAATCAGCTTGAATCAACATATCTTTATATACAAATGGAGTACTGTCCCATGACTCTTCGCCAGATGTTTGAATCGTATAATCATTTTGACAAAGAACTGGCATGGCATTTGTTTCGCCAAATAGTAGAAGGCTTGGCACACATACATGGGCAAGGAATAATTCATCGAGACTTAACACCAAGTAACATATTCTTTGATGCTCGTAATGATATTAAAATCGGTGACTTTGGCCTTGCCAAGTTCTTGAAGTTGGAGCAGCTCGATCAAGATCTAGCCCATCTTGCTGATACAACTGGAGTTTCCATTGATGGCACTGGACAAGTTGGGACATATTTTTATACAGCTCCTGAAATTGAGCAAGGATGGCCTAAGATTGATGAAAAG
537
0.406
MTVFLGQLDFMAWFETGVTDSYGDSGGDSWTPASSTFSYNIASSNDVVGRENQLESTYLYIQMEYCPMTLRQMFESYNHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPSNIFFDARNDIKIGDFGLAKFLKLEQLDQDLAHLADTTGVSIDGTGQVGTYFYTAPEIEQGWPKIDEK
179
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Annotation information
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Seq ID
Length
Analysis
Description
Start
End
IPR
GO
Trme2398g00001
179
Gene3D
Transferase(Phosphotransferase) domain 1
49
179
-
-
Trme2398g00001
179
SMART
serkin_6
2
178
IPR000719
GO:0004672|GO:0005524|GO:0006468
Trme2398g00001
179
Pfam
Protein kinase domain
55
169
IPR000719
GO:0004672|GO:0005524|GO:0006468
Trme2398g00001
179
PANTHER
EUKARYOTIC TRANSLATION INITIATION FACTOR 2-ALPHA KINASE EIF2-ALPHA KINASE -RELATED
33
173
-
-
Trme2398g00001
179
ProSiteProfiles
Protein kinase domain profile.
1
179
IPR000719
GO:0004672|GO:0005524|GO:0006468
Trme2398g00001
179
ProSitePatterns
Tyrosine protein kinases specific active-site signature.
104
116
IPR008266
GO:0004672|GO:0006468
Trme2398g00001
179
SUPERFAMILY
Protein kinase-like (PK-like)
55
178
IPR011009
-
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Duplication type information
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Gene
Chromosome
Start
End
Duplicated_type
Trme2398g00001
Trme-Chr2398
25
1713
Dispersed
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Functional genes information
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Gene
Gene_start
Gene_end
Function
Ath_gene
Identity(%)
E-value
Score
Trme2398g00001
40
131
MAP Kinase Gene Family
AT3G45640
38.043
1.77e-14
68.6
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Transcription factors information
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Regulatory Factors
Family
Gene
Hmm_acc
Hmm_name
E_value
Clan
PK
PEK_GCN2
Trme2398g00001
Pkinase
6.9e-25
CL0016
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Pathway information
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Query
KO
Definition
Second KO
KEGG Genes ID
GHOSTX Score
Trme2398g00001
K16196
-
gmx:100797996
312.383
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