Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme239663g00001 TGTTTTCGGCCACGTGTGGTTCGATATACACGAGGTGGTTCTGATGCTGGTGGTAAACAGGATGGACTTTTGTGGTACAAAGACTTAGGGAAGCACTTGAATGGTGAGTTTTCAATGGCTGTGGTCCAAGCCAACAACTTATTGGAGGACCAAAGCTATATTGAATCGGGTAGTTTGAGTTCCAATGATTCTGGACCGTACGGTACTTTTGTCGGTGTTTATGATGGGCATGGAGGGCCTGAGACATCAAGGTTTATCAATGATCACTTAGTTCACCATCTCAAGAGTAAGTCACATCAAGATGAGTGA 309 0.4434 CFRPRVVRYTRGGSDAGGKQDGLLWYKDLGKHLNGEFSMAVVQANNLLEDQSYIESGSLSSNDSGPYGTFVGVYDGHGGPETSRFINDHLVHHLKSKSHQDE 102
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme239663g00001 102 ProSitePatterns PPM-type phosphatase domain signature. 70 78 IPR000222 GO:0043169
Trme239663g00001 102 Gene3D - 27 102 IPR036457 -
Trme239663g00001 102 SUPERFAMILY PP2C-like 44 96 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme239663g00001 Trme-Chr239663 62 370 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme239663g00001 1 95 PP2C-type Phosphatase Gene Family AT4G38520 72.632 4.48e-47 153
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme239663g00001 - - qsa:O6P43_011433 176.022