Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme239334g00001 GCAGCGAAGGTCACAGGAATGTTGCTGGAAATGGACCAGGCAGAGGTTATCCATCTAATTGAGTCTCCCGAAGAACTGAAGATAAAGGTGTCTGAGGCCATGCAAGTGCTTGATGAAGTTTCACCGAGTTCTGAAGTTAATGATCAGTCTGGCTCATTATAA 162 0.4506 AAKVTGMLLEMDQAEVIHLIESPEELKIKVSEAMQVLDEVSPSSEVNDQSGSL 53
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme239334g00001 53 Gene3D - 1 41 - -
Trme239334g00001 53 SMART poly_2 1 40 IPR002004 GO:0003723
Trme239334g00001 53 SUPERFAMILY PABC (PABP) domain 1 44 IPR036053 GO:0003723
Trme239334g00001 53 ProSiteProfiles Poly(A)-binding protein C-terminal (PABC) domain profile. 1 42 IPR002004 GO:0003723
Trme239334g00001 53 Pfam Poly-adenylate binding protein, unique domain 1 37 IPR002004 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme239334g00001 Trme-Chr239334 2 163 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme239334g00001 1 41 Eukaryotic Initiation Factors Gene Family AT4G34110 75.610 7.62e-15 64.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme239334g00001 K13126 - qsa:O6P43_004137 80.8777