LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Trme23834g00001	ATGGATCATGAATCGAGACAAGTAGTACTTGGTATAGCTGTCCATGAAGTTGTGGCTGAAGCGGATCCTGTCATCTGTGATCCTCCGGCAATTGAAAGTAGTCAACCTCCTGCAATAGAAATTAATCATGCCCCTGCAATAGGAATCGATACTAGTTCGAGTTTCGCGACTGTTGAAGCTTTTAAGGATCGCGATAGTTTAATTACGTGGGTTCGTGGCGTTGCCGAGAAGTTACGGTTTGCTGTTGTGATTCTAAATTCAGACTACGGTTCCGGTAGGAGAAAGCAGAAGCTTGTGTTGGGTTGTGAAAGGAATGGTGTTTACAAACGAACAAGTAAGAAGATAAAATTTGAAGAAACGGGAACGAGGAAATGCGGATGCAAGTTTAAGCTTCGCGGTAATTTTCATGTCACAACCAATGATTGGCATATTAGTGTTTTGAATGGCATACACAACCATGAGTTGGATAAAGAATTAGATGGCCACCTAGTTGCGGGACGTTTGAAACCCAAAGAGATGGAGGTGGTTGCCGAAATGACAAGAAATTTGGTCCCGCCTAGGAATATTATGACAACATTGAAGGAGAGAGATCCGGATAACGTGACGGATATCAAACAGCTGTACAAT	627	0.4274	MDHESRQVVLGIAVHEVVAEADPVICDPPAIESSQPPAIEINHAPAIGIDTSSSFATVEAFKDRDSLITWVRGVAEKLRFAVVILNSDYGSGRRKQKLVLGCERNGVYKRTSKKIKFEETGTRKCGCKFKLRGNFHVTTNDWHISVLNGIHNHELDKELDGHLVAGRLKPKEMEVVAEMTRNLVPPRNIMTTLKERDPDNVTDIKQLYN	209

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Trme23834g00001	209	Pfam	Transcription factor AFT	109	155	IPR014842	GO:0000981\|GO:0036086

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Trme23834g00001	Trme-Chr23834	119	745	Dispersed

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	FAR1	Trme23834g00001		AFT	6.6e-06	CL0274

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Trme23834g00001	-		-	tpra:123892061	212.231