Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme238222g00001 GCTGGTGAGCTAAGTGCCGCTGAGTTGAAGAATTTGATGACTGTGGTTGCNAATCCTAGACAATTCAAAGTACCTAATTGGTTTTTGAACAGAAAGAAAGACTACAAGGATGGAAAGTACTCTCAGGTGGTTTCAAATGCATTGGATATGAAGTTGAGGGATGACTTGGAGAGACTAAAAAAAATCAGGTTATTAACACTTGGATTGTAG 210 0.3857 AGELSAAELKNLMTVVANPRQFKVPNWFLNRKKDYKDGKYSQVVSNALDMKLRDDLERLKKIRLLTLGL 69
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme238222g00001 69 PANTHER 30S RIBOSOMAL PROTEIN S13/40S RIBOSOMAL PROTEIN S18 1 63 - -
Trme238222g00001 69 Gene3D 30s ribosomal protein s13, domain 2 37 66 IPR027437 -
Trme238222g00001 69 Pfam Ribosomal protein S13/S18 2 63 IPR001892 GO:0003723|GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme238222g00001 Trme-Chr238222 163 372 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme238222g00001 1 63 Cytoplasmic Ribosomal Protein Gene Family AT4G09800 90.476 6.63e-39 124
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme238222g00001 K02964 - psom:113357224 123.25