Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme23791g00001 ATGCCCCAAGTGTCTTATTCGAACACAACACTACCTCTTCGCTTGCAGGAAGTTCCTGATAATGAGTTTGAGAAGCGAATAAGGCCTGAAGTAATACCAGCAAACGAAATTGGGGTAACATTCGCCGATATTGGTGCCTTAGAAGAGACTAAAGAGTCACTTCAAGAACTAGTAATGCTTCCCCTTCGAAGGCCAGACCTTTTTGATGGAGGCCTTCTAAAGCCTTGTAGAGGAATATTGTTATTTGGGCCACCTGGCACAGGAAAAACAATGCTGGCAAAGGCCATTGCAAACGAGGCTGGAGCAAGTTTCATTAACGTATCTATGTCTACCATCACCTCTAAATGGTTTGGTGAAGACGAGAAGAATGTTCGTGCTTTATTCACACTGGCAGCCAAGGTCTCCCCAACTATTATATTTGTTGATGAAGTGGATAGTATGCTTGGCCAGCGGACAAGAGTTGGGGAACATGAAGCCATGCGGAAAATAAAGAATGAATTTATGACCAATTGGGATGGACTTACCTCAAAACCATCGGACCGCATCCTTGTCCTCGCTGCAACCAATAGGCCCTTTGACCTGGATGAAGCAATTATTAGACGATTTGAAAGGAG 614 0.443 MPQVSYSNTTLPLRLQEVPDNEFEKRIRPEVIPANEIGVTFADIGALEETKESLQELVMLPLRRPDLFDGGLLKPCRGILLFGPPGTGKTMLAKAIANEAGASFINVSMSTITSKWFGEDEKNVRALFTLAAKVSPTIIFVDEVDSMLGQRTRVGEHEAMRKIKNEFMTNWDGLTSKPSDRILVLAATNRPFDLDEAIIRRFER 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme23791g00001 204 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 15 204 - -
Trme23791g00001 204 SMART AAA_5 75 204 IPR003593 GO:0016887
Trme23791g00001 204 Pfam ATPase family associated with various cellular activities (AAA) 79 204 IPR003959 GO:0005524|GO:0016887
Trme23791g00001 204 FunFam p-loop nucleoside triphosphate hydrolase superfamily protein 38 204 - -
Trme23791g00001 204 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 38 202 IPR027417 -
Trme23791g00001 204 ProSitePatterns AAA-protein family signature. 182 201 IPR003960 GO:0005524|GO:0016887
Trme23791g00001 204 Gene3D - 19 204 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme23791g00001 Trme-Chr23791 427 1040 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme23791g00001 39 204 Calmodulin-binding Proteins AT3G56690 39.053 7.24e-32 119
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme23791g00001 - - rsz:130506585 359.762