Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme23774g00001 TGGGCATTATATCCACCTGGAAAAGTGCCTTTAGGTGTGACGGTACATGTTAATGAAGAAGATGGTGATGTCAGTATTGAGACACCATCATCACTGCAGTGGTGGCTAGATTTTTATCCTCTTCTTGCTGATGAAGACAAGCCGATTGAATGTACACAACTTCCTGGAGAGACAATTTATGTTCCGAGTGGATGGTGGCACTGTATTTTAAATTTGGAAACAACAATTGCAGTCACACAGAATTTTGTGAATTCTAATAACTTTGAATTTGTATGTTTGGATATGGCACCTGGTTATCGTCATAAAGGAGTTTGTCGTGTAGGTTTGCTTGCTCTTGAAGAAGATGTTTATGAAAATGTCATACAGAACATGTCATGTAATGAAGAAAACTTAAGTTACTCTGATTTGTCAAGGAAAGAGAAAAGATCCAAAACTCTGAAAGATGTAGATGATCTATGTTTTGAAAGAGAAATAAGCGGTGTATCTAGAAGCTATAATTTATGGAAAGGTGGATTTTCTTATGATATAAACTTCTTGTCCATGTTTTTGGATAAGGATAGAGACCACTACAGTTCTGAGTGGAGCTCGGGCAACAGCATTGGACAACGAGAACTAAGAGAATGGTTATCCAAGCTTTGGATTCAAAAGCCAGATATGAGAGATCTTATATGGAAGGGAGCATGTATTGCACTAAATGCGGACAAGTGGTTAGAATGCTTGTCAAAAATTTGTGCCTTCAACAATCTGCCCCCTCCCACTGATGACGAAAGGCTTCCTGTTGGTACGGGTAGCAATCCT 798 0.3885 WALYPPGKVPLGVTVHVNEEDGDVSIETPSSLQWWLDFYPLLADEDKPIECTQLPGETIYVPSGWWHCILNLETTIAVTQNFVNSNNFEFVCLDMAPGYRHKGVCRVGLLALEEDVYENVIQNMSCNEENLSYSDLSRKEKRSKTLKDVDDLCFEREISGVSRSYNLWKGGFSYDINFLSMFLDKDRDHYSSEWSSGNSIGQRELREWLSKLWIQKPDMRDLIWKGACIALNADKWLECLSKICAFNNLPPPTDDERLPVGTGSNP 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme23774g00001 266 Gene3D Cupin 1 84 - -
Trme23774g00001 266 ProSiteProfiles JmjC domain profile. 1 99 IPR003347 -
Trme23774g00001 266 Pfam JmjC domain, hydroxylase 44 82 IPR003347 -
Trme23774g00001 266 SUPERFAMILY Clavaminate synthase-like 1 92 - -
Trme23774g00001 266 PANTHER ARGININE DEMETHYLASE AND LYSYL-HYDROXYLASE JMJD 1 261 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme23774g00001 1 266 Glycosyltransferase AT1G78280 72.285 1.73e-138 411
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Trme23774g00001 Cupin_8 9.2e-08 CL0029
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme23774g00001 - - tpra:123918034 566.229