Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Trme237491g00001 ATGGACTTTTTTAAAGAGTGCATGAGGATTGTTGAAAGTTGTCTTACTGATGCTAAGATGGACAAGAGTAGTGTGCATGATGTTGTCCTTGTTGGGGGATCTTCTAGGATTCCCAAAGTGCAGCAGTTATTGGGGGAAATTTTCAATGGGAAGGATCTATGCAAGAGCATCAACCCTGATGAGGCTGTTGCTTATGGTGCAGCTGTGCAAGCTGCTTTGTTGAGTGATGGCTTTAAGAATGTTCCAGACATGGTGCTGCGAGATGTTACACCATTGTCACTAGGTTGGATGCTAGAAGATGATATTATGGGTGTGGTGATTCCGAGAAACACATCTATTCCTGTTAAAAAGACAGAAGAATTTTA 365 0.4192 MDFFKECMRIVESCLTDAKMDKSSVHDVVLVGGSSRIPKVQQLLGEIFNGKDLCKSINPDEAVAYGAAVQAALLSDGFKNVPDMVLRDVTPLSLGWMLEDDIMGVVIPRNTSIPVKKTEEF 121
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Trme237491g00001 121 Gene3D - 7 54 - -
Trme237491g00001 121 Gene3D - 55 72 - -
Trme237491g00001 121 PRINTS 70kDa heat shock protein signature 25 41 - -
Trme237491g00001 121 PRINTS 70kDa heat shock protein signature 57 77 - -
Trme237491g00001 121 PRINTS 70kDa heat shock protein signature 83 102 - -
Trme237491g00001 121 FunFam heat shock 70 kDa protein-like 15 76 - -
Trme237491g00001 121 ProSitePatterns Heat shock hsp70 proteins family signature 3. 28 42 IPR018181 -
Trme237491g00001 121 Pfam Hsp70 protein 2 121 IPR013126 GO:0005524|GO:0140662
Trme237491g00001 121 SUPERFAMILY Actin-like ATPase domain 2 75 IPR043129 -
Trme237491g00001 121 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 80 121 IPR029047 -
Trme237491g00001 121 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 75 121 IPR029047 -
Trme237491g00001 121 PANTHER HEAT SHOCK PROTEIN 70KDA 1 117 IPR013126 GO:0005524|GO:0140662
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Trme237491g00001 Trme-Chr237491 29 393 Dispersed
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme237491g00001 1 121 Calmodulin-binding Proteins AT3G12580 70.492 1.10e-52 173